Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0520 ATGGACATTGTGAAGCAGAAATGCAAGAGGGTATGGGGTCGATGCAGGCGATGCCGTGCAGCTGGAACTGGCAGCGGGTACAATATATTTTCAAAGGCTCGAGAGTCGTTGGGAAAGAGCAAAGGATGCAAGTCTCCCATAGAGGAAAAGAAGAAGAAGCCTCAAGTGGCTCCACAGGGTTGCTTTTCCGTGTACGTTGGACCAGAGAGAGAGAGATTCGTGATGAAGATAGAGCTAGCCAACCACCCAATGTTCAAGATGCTGCTAGACGATGCTGAGAATGAATATGGATTTAGAAACGATGGCCCCATATGGCTTCCTTGCGATGTTAATTTGTTCTGTGAAGCAGTGGCGGAGATGGAGATGGAGAACATGGAGGAGGATATGAGTTTCATAGGTTGCACCTTTTCAAAGAGTTACCCCTCCTCAGTTATGCACAGTCCACTATCCTATCGTTCTAATCAGAGCTACGAGCTTTTGAGTCCCTGCACAGTGGTAATTGATCATAACATGTTGTCCCAATAG 525 0.4686 MDIVKQKCKRVWGRCRRCRAAGTGSGYNIFSKARESLGKSKGCKSPIEEKKKKPQVAPQGCFSVYVGPERERFVMKIELANHPMFKMLLDDAENEYGFRNDGPIWLPCDVNLFCEAVAEMEMENMEEDMSFIGCTFSKSYPSSVMHSPLSYRSNQSYELLSPCTVVIDHNMLSQ 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0520 174 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 46 115 IPR003676 GO:0009733
Glsi02g0520 174 Pfam Auxin responsive protein 39 117 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0520 Glsi-ChrGlsi02 3375859 3376485 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0520 58 118 Calmodulin-binding Proteins AT4G34750 47.541 2.84e-15 67.4