Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0511 ATGGGTTGCGTGCTCGGAACGCCGGCGGGTGCCGGAGGCCGCCGGGAGGACTCTGGAGATCAGCACCGTCGCCGCGGTCGCCAACAACACCCTGTCACTGACGGAGGTAATGCCGTTACGGTTAGGAAGGAAGGGGCGGCGAGGGAGAAGCAAGGGACTCGGCACACCGGCGATTTCCCCGGCACCCTTTTGGCACCGGAGAGAAGAAGACCTAAGCTTGATCCATGCGCTACAACCCAACAGGGTTGGCCATCTTGGTTGATGGCTGTGGCTGGCGACGCAATCCAAGATTGGTCTCCCCGTCGGGCCAACACGTTTGAGAAACTTGCTAAGATTGGGCAAGGGACTTACAGCAATGTATATAAAGCTAGAGATCTTCTTACTGGAAAGATAGTGGCTTTAAAGAAAGTTAGGTTTGATAATCTGGAGCCAGAGAGTGTGAAGTTCATGGCAAGAGAGATTCTTGTTTTGAGGCGGCTTGATCACCCCAATGTCGTAAAACTTGAAGGCTTGGTTACTTCAAGAATGTCATGTAGTCTTTACTTAGTATTCGAGTATATGGAACATGATCTTGCGGGGCTTGCAGCTGGCCAAGGTGTTAAGTTTACTGAGCCTCAGGTCAAATGCTATATGAAGCAATTACTCTCTGGCCTTGAGCATTGCCACAGCCGAGGTGTCTTGCACCGTGATATCAAGGGTTCCAATCTGCTCATTGACAACGAAGGAATCCTTAAAATAGCAGATTTTGGACTAGCAACATACTATGATGCTAACCAAAAGCAGCCCATGACAAGTAGAGTTGTCACCCTTTGGTACCGGCCCCCTGAGCTTCTTCTTGGGGCTACACTCTATGGTGTTGGTATTGACCTTTGGAGTGCTGGCTGCATCTTGGCAGAGCTGCTTGCTGGGAAGCCCATCATGCCTGGCAGAACAGAGGTTGAGCAACTGCACAAAATATTTAAATTATGTGGCTCTCCATCAGAGGAATATTGGAAGAAATATAGATTGCCAAATGCTACACTCTTTAAGCCACAGCAGCCTTATAAACGTTGCCTTTCAGAAACCTTCAAGGATTTCCCTCCTTCTTCATTACCTGTAATTGAAAATCTTCTTGCAATAGATCCAGATGATCGTGGCACTGCCTCAGCTGCTCTATGTAGTGAATTCTTTACAACTGAGCCCTATGCTTGTGAACCATCAAGTTTACCAAAGTATCCTCCCAGCAAAGAATTGGATGTAAAACTGAGAGATGAAGAAGCGAGAAGGCAAAAAGCTCTAAGTGGGAAAGCTAATGCAGTTGAAGGTGCCAGACGAGTCAGAATACGTGATCGTGGTCGGGCCATTCCTGCTCCAGATGCCAATGCAGAGATGCAAGCAAACTTAGACAAGTGGAGAGTTGTGACTCATGCAAATGCAAAAAGCAAAAGTGAGAAATTTCCACCTCCTCATCAGGATGGAGCTGTTGGATATCCATCGGATGCATCTCATAAAGGACCTGTTTCATTTGGTGCCGCTGATGCTTCCTTTGGCTCAGCAATATTTAATTCAAAACCTTCAGGATCTGTTAGAAGTCATGCTGCCGCAGGACCTTACAGAAGGAGGAAAATTAATAATGCAGACTCTCAGATGGCGTCATCATGGAAATTTATGCGTGCCTTCAAGCCATCATCAGTAGGCCTACCAATGGATTTATTATTTAGGAGGAAATAA 1710 0.4708 MGCVLGTPAGAGGRREDSGDQHRRRGRQQHPVTDGGNAVTVRKEGAAREKQGTRHTGDFPGTLLAPERRRPKLDPCATTQQGWPSWLMAVAGDAIQDWSPRRANTFEKLAKIGQGTYSNVYKARDLLTGKIVALKKVRFDNLEPESVKFMAREILVLRRLDHPNVVKLEGLVTSRMSCSLYLVFEYMEHDLAGLAAGQGVKFTEPQVKCYMKQLLSGLEHCHSRGVLHRDIKGSNLLIDNEGILKIADFGLATYYDANQKQPMTSRVVTLWYRPPELLLGATLYGVGIDLWSAGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKYRLPNATLFKPQQPYKRCLSETFKDFPPSSLPVIENLLAIDPDDRGTASAALCSEFFTTEPYACEPSSLPKYPPSKELDVKLRDEEARRQKALSGKANAVEGARRVRIRDRGRAIPAPDANAEMQANLDKWRVVTHANAKSKSEKFPPPHQDGAVGYPSDASHKGPVSFGAADASFGSAIFNSKPSGSVRSHAAAGPYRRRKINNADSQMASSWKFMRAFKPSSVGLPMDLLFRRK 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0511 569 MobiDBLite consensus disorder prediction 1 78 - -
Glsi02g0511 569 SMART serkin_6 106 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g0511 569 FunFam probable serine/threonine-protein kinase At1g54610 189 430 - -
Glsi02g0511 569 MobiDBLite consensus disorder prediction 472 494 - -
Glsi02g0511 569 ProSitePatterns Serine/Threonine protein kinases active-site signature. 226 238 IPR008271 GO:0004672|GO:0006468
Glsi02g0511 569 SUPERFAMILY Protein kinase-like (PK-like) 100 395 IPR011009 -
Glsi02g0511 569 CDD STKc_CDK9_like 106 390 - -
Glsi02g0511 569 ProSitePatterns Protein kinases ATP-binding region signature. 112 135 IPR017441 GO:0005524
Glsi02g0511 569 Gene3D Transferase(Phosphotransferase) domain 1 189 430 - -
Glsi02g0511 569 ProSiteProfiles Protein kinase domain profile. 106 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g0511 569 Gene3D Phosphorylase Kinase; domain 1 92 188 - -
Glsi02g0511 569 PANTHER CELL DIVISION PROTEIN KINASE 104 394 - -
Glsi02g0511 569 MobiDBLite consensus disorder prediction 15 30 - -
Glsi02g0511 569 Pfam Protein kinase domain 106 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g0511 569 FunFam probable serine/threonine-protein kinase At1g54610 93 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0511 Glsi-ChrGlsi02 3303124 3307437 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0511 98 424 Core Cell Cycle Gene Families AT5G10270 51.714 2.65e-116 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Glsi02g0511 Pkinase 2.8e-67 CL0016