Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0510 ATGGATGACGGCTGCCAACATGAAAATGGTAGGCATAAGATGGATTACTACAGAGGAGCACATTACCCGTGGAGTATGGCTCCCCAACATCAAGTAAAGGAACCAAATGCCTTGGTTATGAACAAGAAAATTATGTCCATTATGGCTGAGAGGGAGGCTGCCATTCGAGAACGAAATGCAGCTTTATCTGAAAAGAATGACGCCTTGGCTGCTCGAGATGAAGCCCTTCGGCAGAGGGATGAAGCACTTGCCCAGAGGGATAATGCTCTAATGGAACGGGATAATGCCCTTGCTGCCCTTCACATACGGGACAGTGCTGTTGACTTCCCATTGGGTAGTGGAATTCAACGTGGTTCAAAACGGATGCACCATTCCTCAAACCATCTAGTTGACATTGCAGAAGCTGCATACAGCTCAAAGGATATGACTATAACTGAGGCCTTCCCAGTAACTGTTATTGCTTCTGAAGCTGTTAAACCTTATCAGGCTAAGAGAAGGAAGGATAACATGGAAATTTCTTCTAAGGCATCAAAGCCACCTAGCAAAGGAAAGAAAGTGGGCGAGGATTTAAATAGGCTGGCTTCTTCTGAAGGAATAAAAATTAAATCTGAGTGGGATAGGCAGGATTTTGGCTTGAATTTGGTTACATTTGATGAAACTACCATGCAGGCCCCAGTTTGCACATGCACTGGAGTACCGCGGCAGTGCTACAAATGGGGGAATGGTGGATGGCAGTCATCTTGTTGTACCACCACCTTGTCAATGCATCCACTGCCTCAGCTTCCAAACAAGCGTCATGCCCGAGTTGGTGGACGAAAGATGAGTGGAAGTGTCTTTACAAGACTACTCAGTAGGTTAGCAGCAGAAGGCCATGATATATCTATACCATTGGATCTCAAGGAATTCTGGGCCAGACATGGAACAAATCGCTACATCACTATCAAGTAG 948 0.4568 MDDGCQHENGRHKMDYYRGAHYPWSMAPQHQVKEPNALVMNKKIMSIMAEREAAIRERNAALSEKNDALAARDEALRQRDEALAQRDNALMERDNALAALHIRDSAVDFPLGSGIQRGSKRMHHSSNHLVDIAEAAYSSKDMTITEAFPVTVIASEAVKPYQAKRRKDNMEISSKASKPPSKGKKVGEDLNRLASSEGIKIKSEWDRQDFGLNLVTFDETTMQAPVCTCTGVPRQCYKWGNGGWQSSCCTTTLSMHPLPQLPNKRHARVGGRKMSGSVFTRLLSRLAAEGHDISIPLDLKEFWARHGTNRYITIK 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0510 315 SMART GAGA_bind_2 1 315 IPR010409 -
Glsi02g0510 315 Coils Coil 65 92 - -
Glsi02g0510 315 PANTHER - 14 315 IPR010409 -
Glsi02g0510 315 Pfam GAGA binding protein-like family 1 315 IPR010409 -
Glsi02g0510 315 MobiDBLite consensus disorder prediction 163 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0510 Glsi-ChrGlsi02 3298215 3299249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0510 1 315 BBR or BPC Transcription factor family AT2G21240 57.413 3.91e-128 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Glsi02g0510 GAGA_bind 5.8e-99 No_clan