Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0501 ATGTTGTGCTCATTCAATTGTTGGTTAGCAGTGTGGAACCGGGGGAAAAAAAAAACAAAGTTGATGAGATTAGACCAGTCAAATGTAAAGCCTTTGCATGGGAATACTTACTCCAAAAGATTTCAGCATTTGATGCGTCCAGAGAGGTACTTTATATATAGACCCCTGCCCTCTTCTCGGTTTGGCCTCAGACCCCCTTTTTCTGACTCCTCGCTGCCTTCAACTATCATCACCACTGCACTCCCTGTACCCTCCCTGCCTCCCTTTCTTCCATCACTTTCTTCCATTTTCTCTCACATGGCAGCTTTTTCATTCCATCCTTTTCTTGTTGACTCCTCATCCCTCCCCAATGCTCTTATAAACACTGCCCTTTCTTCTCAACTTCGCACATCCCAATTACCTAACGTTCCGACTCAGGAAACTAGTTGTGTTGATCATCCAAGCTCCATCATGACTGTCAGTGAGAATGAGCCTTCTGTGACCAAAACCCACGCTCCTGAAACCTCCATGGTCGTGGATCATAAGCTTCAAACTGGGGAACAGGTCACTCACAAGGTAAATCCTATGGGCAAGAAGAGGAGAAACAGAAACAGGTCTTCTTCCTTGAGTTTCTCCCCATCCAAGGACCCAACCGAAGGCGGAAACAAGAAACAAAAGAATAGCAAGGTTGAGGTGAAAGAAGAGGAAAAGCCAAAAGCAGAGAAGAAGGATCAGATTAAAAGTCCTGAAGAGCCCCCAAAGGACTATATCCATGTCAGAGCAAGAAGAGGTCAAGCAACGGATAGCCACAGCCTTGCTGAAAGGGTAAGAAGAGAGAAAATAAGTGAGAGGATGAAGATGTTGCAGCGGCTTGTCCCGGGCTGTGATAAGTTCTTGTCAATGAAGCTTGCTTCTGTGAATCCCATGTTCTCTGACTTCTCAATGGACCTAGACACCCTTATGGTTAGACCAGAGATATTCAATAGCATAGCATCACCTCCTCTACCATCTTTACCGCAATGCAGCACCAACCAGGCCACAACTTTTCCTAATACAACCACCAGCTTCGCCGCTGCTAGTGACTACCTTTTGGACAACTCAGCTTCGGTTTTTCTTCAAGCACAGAGGGCGAATGTCTTCCCCGAGTTGATTTCACCGTTATTGAGAAATGAGAAGTTGATGCTAGTTACTGATCATGTTCTCGATATGACTAGCCTTGCATTTTCTGGTTTATATCCTGCTTCCAGGAAAGTAGAAAAGGGAGAGAAACCAAATAAAAAGGAAAATTGCTTTCAAAGGAATCTTTTCTGTGACAGAAACAACTACAGTTTTGCCGCTGCCAATGAAAACTGGAACTGTCTCCCGAGTTTACGAGCAAGAAAAAGAAGGAAACTTCGAGTGTTTAATCTCCATCTTGGCTTTGTTGAGGGGCAAAAGATAAGGAGAGGAGATCATCCGATTCAGATTGACAAGACTTGGGAAGGTGAGACGGTGGAAGACCGTGGTGAAGGAGATGGGTGGGATCCAGAGGGAGGTGGAGTCCACAAGGGTCCACACGGAGAACCAAACACCGCATGGCATGGGCCCTTGGGCTCAGGGCATTGA 1584 0.4583 MLCSFNCWLAVWNRGKKKTKLMRLDQSNVKPLHGNTYSKRFQHLMRPERYFIYRPLPSSRFGLRPPFSDSSLPSTIITTALPVPSLPPFLPSLSSIFSHMAAFSFHPFLVDSSSLPNALINTALSSQLRTSQLPNVPTQETSCVDHPSSIMTVSENEPSVTKTHAPETSMVVDHKLQTGEQVTHKVNPMGKKRRNRNRSSSLSFSPSKDPTEGGNKKQKNSKVEVKEEEKPKAEKKDQIKSPEEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKMLQRLVPGCDKFLSMKLASVNPMFSDFSMDLDTLMVRPEIFNSIASPPLPSLPQCSTNQATTFPNTTTSFAAASDYLLDNSASVFLQAQRANVFPELISPLLRNEKLMLVTDHVLDMTSLAFSGLYPASRKVEKGEKPNKKENCFQRNLFCDRNNYSFAAANENWNCLPSLRARKRRKLRVFNLHLGFVEGQKIRRGDHPIQIDKTWEGETVEDRGEGDGWDPEGGGVHKGPHGEPNTAWHGPLGSGH 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0501 527 MobiDBLite consensus disorder prediction 153 267 - -
Glsi02g0501 527 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 256 290 IPR036638 GO:0046983
Glsi02g0501 527 Coils Coil 216 236 - -
Glsi02g0501 527 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 132 290 IPR024097 GO:0006355
Glsi02g0501 527 MobiDBLite consensus disorder prediction 487 527 - -
Glsi02g0501 527 MobiDBLite consensus disorder prediction 212 267 - -
Glsi02g0501 527 Gene3D - 248 301 IPR036638 GO:0046983
Glsi02g0501 527 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 258 310 IPR011598 GO:0046983
Glsi02g0501 527 MobiDBLite consensus disorder prediction 487 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0501 Glsi-ChrGlsi02 3234135 3240911 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0501 211 361 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50915 45.402 9.89e-34 127