Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0496 ATGGTGTACTGGAATCCACCATTTCCAGCAACAGAGAGATACTACATTATTAAGAAGCGTGACTTTCGTTTACAGAGAAAACCTGGATATTCCACATCCTGTGAATCTGGTTCAGATGCTGCTATAAGGACTTTGAATCACTCCAATATGTTTGCCAAACCACAAGCATCCACAAATTCCGCTATTGTATGCATGAGTAGCATCCAGTTTTGGGTTTTAACAAAGGTAGAGCAGCTGGTCATTACAGAAAGTGGGTTTCCTCGACTTTCCTTGGAATCCCCATCCTGGAACCACTTATTTTGTCGATGTGCAAATCTTATTCGTACTCTTTCTCTGCGCTCTGCCTCGGCCCTCTCTCCATTTGTGGAAATCATGAGCTGCCCAACATGGAAGGCCATGGCATTGGCGGCAGTGTTGTTTCAACTGGGTTTTGTCTTGGAGGTCGAGTGTCTCTCTTCTCACGCTGATAGGATTTTCCGGCTTCCTGGACAACCCCAGGTAGGCTTCCAACAGTTCTCAGGATATGTTACAGTCGATGATAAGCAAAAAAAGGCTATGTTTTACTATTTTGCTGAATCAGAAATCGATCCAGCTTCAAAGCCTCTGGTTCTCTGGCTCAATGGAGGACCTGGTTGTTCTTCTTTGGGAGTTGGTGCATTCTCTGAAAATGGACCTTTCAGACCAAATGGGGAAGTTCTGATTCAAAATAAGTATAGTTGGAACAGAGAGGCAAACATGTTGTATTTGGAGACACCAGTTGGAGTGGGGTTCTCGTATGCTAAAGGTAGCTCCTCCTATTTGACAGTAAATGACGAGGCAACAGCTAGGGACAACCTTGTATTCCTGCAACGCTGGTTCAACAAGTTCCCCCAATACAGGCACCGAGATTTGTTTCTGACAGGTGAAAGTTATGCAGGGCATTATGTTCCTCAACTTGCAAAGCTAATGATTGAAATAGACAAAGAGGAGAAGATATTCAATCTTAAAGGCGTTGCCTTGGGTAATCCAGTTCTAGAATATGCCACCGACTTCAATTCAAGGGCTGAGTTCTTCTGGTCTCACGGATTAATATCAGATTCAACGTACAAAATGTTCACTGCAGCGTGTAATTATTCTCGGTACGTTAGTGAATACTATAGAGACTCAGTTTCGCCTCTTTGTTCAAAGGTTATGGGCCTAGTGGGCAGAGAAACCAGTAAATTTGTGGACAAATACGATGTCACCCTTGATGTATGTATATCATCGGTGCTTTCACAGTCGAAGGTTATTTGTCCTCAAACCCAACAAGCAAATGAGATGATAGATGTATGTGTAGATGACAAAGTTACAAATTACTTAAACCGAAGGGATGTCCACAAGGCGCTTCATGCCAGGCTTGTTGGAGTTCGCAAGTGGGATGTCTGCAGCAACATCCTGGACTATGATATGCTCAACCTGGAAGTGCCTACTCTTCCCGTTGTTGGATCGCTAATAAAAGCTGGAGTTCGGGTCTTAATTTACAGTGGAGATCAAGATTCTGTAATTCCTCTGACTGGGAGCCGCACCTTGGTTCAAAAATTAGCAAGGCAATTACAATTGAATACAACAGTCCCTTACAGAGTATGGTTTGAAGGCCAGCAGGTTGGTGGGTGGACTCAAGTTTATGGTAATATCCTCTCGTTTGCCACCGTCAGAGGTGCCTCTCATGAAGTTCCTTTCTCACAGCCCGAGAGATCGCTTGTGCTATTCAAGTCATTTTTGGAAGGCAGGCCTCTACCTGAAATATTCTGA 1770 0.439 MVYWNPPFPATERYYIIKKRDFRLQRKPGYSTSCESGSDAAIRTLNHSNMFAKPQASTNSAIVCMSSIQFWVLTKVEQLVITESGFPRLSLESPSWNHLFCRCANLIRTLSLRSASALSPFVEIMSCPTWKAMALAAVLFQLGFVLEVECLSSHADRIFRLPGQPQVGFQQFSGYVTVDDKQKKAMFYYFAESEIDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGEVLIQNKYSWNREANMLYLETPVGVGFSYAKGSSSYLTVNDEATARDNLVFLQRWFNKFPQYRHRDLFLTGESYAGHYVPQLAKLMIEIDKEEKIFNLKGVALGNPVLEYATDFNSRAEFFWSHGLISDSTYKMFTAACNYSRYVSEYYRDSVSPLCSKVMGLVGRETSKFVDKYDVTLDVCISSVLSQSKVICPQTQQANEMIDVCVDDKVTNYLNRRDVHKALHARLVGVRKWDVCSNILDYDMLNLEVPTLPVVGSLIKAGVRVLIYSGDQDSVIPLTGSRTLVQKLARQLQLNTTVPYRVWFEGQQVGGWTQVYGNILSFATVRGASHEVPFSQPERSLVLFKSFLEGRPLPEIF 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0496 589 Gene3D - 437 473 - -
Glsi02g0496 589 Gene3D alpha/beta hydrolase 153 414 IPR029058 -
Glsi02g0496 589 SUPERFAMILY alpha/beta-Hydrolases 160 586 IPR029058 -
Glsi02g0496 589 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 159 569 IPR001563 GO:0004185|GO:0006508
Glsi02g0496 589 Pfam Serine carboxypeptidase 162 582 IPR001563 GO:0004185|GO:0006508
Glsi02g0496 589 FunFam Carboxypeptidase 483 582 - -
Glsi02g0496 589 Gene3D - 483 582 - -
Glsi02g0496 589 ProSitePatterns Serine carboxypeptidases, histidine active site. 552 569 IPR033124 GO:0004185
Glsi02g0496 589 PRINTS Carboxypeptidase C serine protease (S10) family signature 552 565 IPR001563 GO:0004185|GO:0006508
Glsi02g0496 589 PRINTS Carboxypeptidase C serine protease (S10) family signature 249 259 IPR001563 GO:0004185|GO:0006508
Glsi02g0496 589 PRINTS Carboxypeptidase C serine protease (S10) family signature 285 310 IPR001563 GO:0004185|GO:0006508
Glsi02g0496 589 PRINTS Carboxypeptidase C serine protease (S10) family signature 236 248 IPR001563 GO:0004185|GO:0006508
Glsi02g0496 589 FunFam Carboxypeptidase 151 586 - -
Glsi02g0496 589 ProSitePatterns Serine carboxypeptidases, serine active site. 299 306 IPR018202 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0496 Glsi-ChrGlsi02 3194468 3200480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0496 445 585 Calmodulin-binding Proteins AT2G22960 28.369 2.80e-15 72.8