Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0495 ATGTCTCTGGTGAAGGACGATTTACTGGCAAACCCCATCCCCCTTCAGCCCTTTTCTTTACTTTGTCTGCAGGGCAAAGACGAAGATAAGGAATTGGAACTCGGATCCGACGAGCCTGAGGCCCCATTGCCTCTTAAAGCTACTTCCCGGGTCTTGTATATGTTGGGAGACATCACGGCAGGGCCTGCGTTTAGGTTCACGCAATGGCTCGAATCGGTCCGTAAACGCACTGCCAAGTATCGCTCCTCTGGCTTCCCCCACCGCCCTTCGAGGCATCTTGATTCTATGCCTTCTAGCGCGGGAGAATCTATGGAGGACACAAAATGTGATTCACCTCCCGTGCAAACTACAGAAATCAGTTTGTGGGAAAGGCTTGGCAATGCTGCTATGTTGGACATTGAATCCAGCTCCTTTTCTTGGGAGAGGCTCTCTTCACTGCACCACACTGAACACAGCAGCAGCAATGAACATTCTGAGGATGAAATGAACAAAGCTCTCGAGGTAACTGTAAATTCTGGGGGAGTTGTCTTCTTTGCCTTTTTTAATCGCCTTGGGAGTGATGATACTTTTCCGAAGGAGGCAGCTGCTGTTATAAAAATATCATCATCAAGAATGGCAACACAATCTGAACGCCTTGGTTATGAATTTGCCAAGTGGTTGGGAGTCAAAACTCCTCAGGCTAGAGTCATTCACAATACCAGTCCTGAGTGGCTCCAAATAAAGGAAGCAGCAGAAAAAGCTAGAAATGCAGCATTTTTTGAAGGAGATGAAATTGGTGAAATGACATGTCTAGAACTTTTGGAAGCACTTGAGCTTAGTCGGTGCCTCTTTTTTATGAGTTATGTACATGGGTCACCCTTACTTGAAAGTTCAAGTGCATTTGAGTCACCGGCATCTGCAGAAGGAGCATCAGCAGCTCTTGGCAGGGTATTGATGCTAGACCTTGTCATCAGAAATGAAGATAGGCTCCCCTGCCGTCAGCTTAGATGGCGTGGGAATTCTGCAAATTTGTTGTTGGCTGAAAGGATGATCTCTGCAACTACCAATACACTAGAAGAAGCTTTAGATTCTACAATGAATCAATATAGACCAAGGGTGATTAGGGCACTTCAAAAAGAAAGAAGGTCAACCTCACTAAGTGCCAGATTGGTTATTCATAATCCTGGATTGCTATCACAGGCCTCTGATACATCAGAGATCTCAGAATCATCAAGATCCAGTGATATGAACCTTAAAGGTCATACATCAGGTGAACCACAGGGTACTGGCTCTAACATTGTGGCTATCGATTCTGGTGTTCCTCGCCGACCCCCTGCTGGAAAACGTGCAGATGATCAAGCTAATTATCCTAAATTGGTTGAGCTACTACTCAATAGTTCTGAGTTTGCCTCTAACCTGTTACATGATATAACTGGAGGGAAATTAGGATATCCTTCAATGGAAGAAATGAATACAACAACTGATGTACATGCAAGTGACATGGCATCAGTAGTTCATGAGTTCCGTAGTGGTTTCCGTGCTGCTCTTAGGGATCTGCAGGGGTTTCATATATTCCTACTCACACTTCACCAAAAACTTGACAGCTTGTTTAGATCATTTATGACCATTATAAGCAAGGTATCATTGGGGGAGTCTGACAAAGAGGATTCAGTGGTTCTGGACTCACCTTCACAGGCTGCTGGAGATGGTAGCTGTCCCTCTCCAGCAAGTAAGGAGAGGTCTGTTAATGAAAACCATCTAGATTTTGGTGATTCAGAATCACAGAGAACTGCTCCAAGGGCATCATCATCAGGGAATAGAGAAAGCTCTGACTTTGCTTCTCCTATCTCAAGGGAAGGTTGGCATGGAAAGTTCCATAAAGGAAGCGGGGAGCCACTTCGTAGTCTTCGCTTGACAGCAAAGCTCCGTGACTTCCATAAATTTGCCAAGGTCGATGCAGAATCTAATAAAGAATTGGAACAGTGGAATGAAATGCTTAAAAGTGATGGCGTCAAGCTATGCCAGGACAACAATTTCAATACAGGATTTTTTGAGTGTAGTGATAATAACAGCATTGTTGATGCATATGAACTGAAGGTCAGACTTGAGCATATTCTTGAAAGGATTGCATTGATATCTGAGGCTGCAAATACAGAGAAGCCATCTGCTGTGACAAATAGTCTGTTCATTGGTGGAGCACTGGCCGCAAGATCTGTATACACACTGCAACACTTGGGAATCACACATATTCTGTGTTTGTGCACCAACGAAATTGGACAGTCAGATTCTCAGTTTCCTGATCTGTTTGTGTACAAAAATTTCTATGTATGTGATAATGAAGATTCTAACATCAGCAGCACATTTGAAGAAGCTTGTGATTTTATAGATAATGTTGAACGAGCAGGTCAGAGAATTTTAGTTCATTGCTTTGAAGGAAAAAGCAGAAGCGTCACATTGGTCCTTGCATACTTAATGCTCAGGAAGAAGTTCACTCTATTAGAAGCATGGAATGCTGTAAAACGAGTTCACCGTCGAGCACAACCCAATGATGGTTTTGCAAAGATCTTGCTAGAACTGGATAAGAAATTGCATGGAAAGGTTTCCATGGAGTGGCAGCAAAGGAAACCAATGATGAAAGTTTGTCCCATCTGTGGGAAGAATGCCGGACTAAGCAGTAGCTCGCTTAAGCTCCATCTTCAGAAATCACATAAAAAACTATCATCTGGGAGCGTAGACAGTGCCATGACAATGGAGATCCAAAAGGCTTTAACAGCTTTGAAAATTATTCGTGGTGGGAGTGTCAGCCCCACTCAAAGGCAGCCTCATTCAAATATGGATGAATAG 2823 0.4364 MSLVKDDLLANPIPLQPFSLLCLQGKDEDKELELGSDEPEAPLPLKATSRVLYMLGDITAGPAFRFTQWLESVRKRTAKYRSSGFPHRPSRHLDSMPSSAGESMEDTKCDSPPVQTTEISLWERLGNAAMLDIESSSFSWERLSSLHHTEHSSSNEHSEDEMNKALEVTVNSGGVVFFAFFNRLGSDDTFPKEAAAVIKISSSRMATQSERLGYEFAKWLGVKTPQARVIHNTSPEWLQIKEAAEKARNAAFFEGDEIGEMTCLELLEALELSRCLFFMSYVHGSPLLESSSAFESPASAEGASAALGRVLMLDLVIRNEDRLPCRQLRWRGNSANLLLAERMISATTNTLEEALDSTMNQYRPRVIRALQKERRSTSLSARLVIHNPGLLSQASDTSEISESSRSSDMNLKGHTSGEPQGTGSNIVAIDSGVPRRPPAGKRADDQANYPKLVELLLNSSEFASNLLHDITGGKLGYPSMEEMNTTTDVHASDMASVVHEFRSGFRAALRDLQGFHIFLLTLHQKLDSLFRSFMTIISKVSLGESDKEDSVVLDSPSQAAGDGSCPSPASKERSVNENHLDFGDSESQRTAPRASSSGNRESSDFASPISREGWHGKFHKGSGEPLRSLRLTAKLRDFHKFAKVDAESNKELEQWNEMLKSDGVKLCQDNNFNTGFFECSDNNSIVDAYELKVRLEHILERIALISEAANTEKPSAVTNSLFIGGALAARSVYTLQHLGITHILCLCTNEIGQSDSQFPDLFVYKNFYVCDNEDSNISSTFEEACDFIDNVERAGQRILVHCFEGKSRSVTLVLAYLMLRKKFTLLEAWNAVKRVHRRAQPNDGFAKILLELDKKLHGKVSMEWQQRKPMMKVCPICGKNAGLSSSSLKLHLQKSHKKLSSGSVDSAMTMEIQKALTALKIIRGGSVSPTQRQPHSNMDE 940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0495 940 Pfam Dual specificity phosphatase, catalytic domain 727 854 IPR000340 GO:0008138|GO:0016311
Glsi02g0495 940 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 37 939 IPR035010 GO:0004721|GO:0009737|GO:0043622
Glsi02g0495 940 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 713 858 IPR029021 -
Glsi02g0495 940 CDD DSP 714 851 - -
Glsi02g0495 940 MobiDBLite consensus disorder prediction 394 427 - -
Glsi02g0495 940 SUPERFAMILY Protein kinase-like (PK-like) 68 446 IPR011009 -
Glsi02g0495 940 Gene3D Protein tyrosine phosphatase superfamily 695 868 IPR029021 -
Glsi02g0495 940 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 779 834 IPR000387 GO:0016311|GO:0016791
Glsi02g0495 940 SMART dsp_5 713 855 IPR020422 GO:0006470|GO:0008138
Glsi02g0495 940 MobiDBLite consensus disorder prediction 81 113 - -
Glsi02g0495 940 MobiDBLite consensus disorder prediction 547 623 - -
Glsi02g0495 940 ProSiteProfiles Dual specificity protein phosphatase domain profile. 713 858 IPR020422 GO:0006470|GO:0008138
Glsi02g0495 940 MobiDBLite consensus disorder prediction 96 113 - -
Glsi02g0495 940 FunFam Dual specificity protein phosphatase PHS1 685 859 - -
Glsi02g0495 940 Gene3D - 288 539 IPR036940 -
Glsi02g0495 940 MobiDBLite consensus disorder prediction 588 606 - -
Glsi02g0495 940 MobiDBLite consensus disorder prediction 394 445 - -
Glsi02g0495 940 Pfam Actin-fragmin kinase, catalytic 118 384 IPR015275 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0495 Glsi-ChrGlsi02 3185615 3193438 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0495 24 924 Protein tyrosine phosphatase (PTP) family AT5G23720 66.007 0.0 1159