Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0491 ATGGCATCATCAGAGGTATCAATCAAGGATTGTGTGAACGGGAAGGGGGAAAGCTACTCTTCCGGTTACAACAACCTTAACGACGCTAGGAACGCTAAAGAGGGTCCAAATGCTCAATCATCGGCCCTGAGAGATGCGGAAGCTGCGCTTTACAGAGAGCTATGGCATGCCTGTGCTGGTCCCCTTGTCACAGTGCCCCGGGAAGGAGAGCGGGTCTTCTATTTTCCTCAGGGACATATCGAGCAGGTGGAGGCGTCCACGAATCAGGTTGCGGACCAGCATATGCCCGTGTACGATCTCCCTTCCAAAATCCTTTGTCGGGTGATCAACGTGATGCTGAAGGCCGAGCCTGATACCGACGAGGTGTTTGCCCAGGTCACCTTGCTTCCGGAGTCAAATCAAGATGAAAGCGCCGTGGAGAAAGAGCCTCCACCACCTCCACCACCTCGATTTCACGTGCATTCGTTCTGTAAAACTCTGACGGCCTCTGATACGAGTACCCATGGTGGGTTTTCGGTTCTGAGACGACATGCTGATGAATGCCTTCCTCCGCTGGACATGACAAAGCAGCCACCTACCCAGGAGTTGGCGGCGAAAGATCTGCACGGCACTGAGTGGCGATTCAGGCATATATTTCGGGGTCAACCACGTAGACACTTACTGCAAAGTGGTTGGAGCGTTTTTGTCAGCTCCAAGAGGCTTGTTGCTGGTGATGCATTTATATTTCTAAGGGGCGGGAATGGGGAACTTCGCGTTGGTGTCAGGCGGGCAATGAGACAGCAGGGTAATGTTCCATCCTCAGTGATCTCCAGTCACAGCATGCATCTTGGTGTCCTTGCAACTGCTTGGCATGCCGTCTCAACGGGTACCATGTTCACTGTTTATTACAAGCCAAGGACCAGTCCTGCTGAATTTATTGTTCCATATGATCAATATATGGAGTCTCTTAAATATAACTACACCATAGGGATGCGGTTTAAAATGAGGTTTGAAGGTGAAGAGGCTCCAGAGCAAAGGTTTACTGGTACCATTGTTGGAATTGAAGATGCTGACCCCAACAGGTGGGCAAAATCCAAATGGAGATGCCTCCAGGTGAGATGGGATGAATCATCTAACATAACTCGTCCCGAGAGAGTTTCCCCTTGGAAAATAGAGCCTGCTCTTGCCCCTCCGGCTCTGCATCCTCTTCCAATGCCCAGGCCTAAAAGGCCTCGGACTAATGTGGTTCCCTTATCCCCTGACTCCTCTGTTCTCACTCGAGAAGCCTCATCTAAAGTCAGTGTAGACCCTTCACCAGCAAATGGGCTTTCAAGGGTCTTGCAAGGTCAAGAATTATCGACCTTGAGAGGCAATTTTGTAGAAAGCAATGAGTCTGATGCTGCAGAAAAGTCAGTTGTGTGGCCACCTGCTGTAGATGATGAAAAGATTGACATGGTTTCTACTTCAAGAAGGTATGGGTCAGAGAGATGGATGTCAATGGGGAGACATGAGCCAACATGTACAGATCTACTATCAGGCTTTGGGGCCGGTGGAGATTCTTCCCGTCCACCCCTGGTTGATCAAACTGGTCCTGTGGCTAGTCCTGCCAGAAAACATTCGTTGGACCATGAGGGCAAGTTTAATGTACTGGCCAGTCCATGGCCCGTAATGCCATCTAGTCTATCACTTAACCTCTTGGACTCAAATGTAAAAGGTTCTGTGCATGGTGGTGATGTATCGTACCAAGCTCCAGGGAACGTGAGGTATGGTGCATTTGGTGACTACCCTGTGCTCCATGGTCATAAAGTCCATCATTTAAATGGGAATTTGTTGATGCCACCGCCACCTACAACTCAATATGACAGTCCCCGTTCAAGAGAGCTGAGGCGCAAACCAGTATCAGCGCAAACATGTGAGGCTGTGAAACCAAAAGATGGGGACTGTAAGCTCTTTGGCTTCTCACTTATCGGTGGCCCGATTACACCAGAGCCTTCTGTATCACAAAGAAATGTGACTAGTGAGTCACCTGGTCACATGCATCTTTCATCTCACCAGTCTCATACTTTTGAAAGTGGTCAGAAGTCAGAACAATCGAGTAGTTCAAAACAGACTGATGTTCTAGTTGCTGTTGATGACCAAGAGAATCCATTACAAGCTTGTCAGACACATATGAAAGATGTTCAAGCCAAACCACACGGTGGTTCTGCTAGGAGTTGCACTAAAGTTCACAAGAAGGGTATTGCACTTGGTCGGTCGGTGGACCTTACGAAGTTCAGCAACTATGTTGAATTAGTAGCTGAATTGGACCAGCTGTTTGAATTTGGTGGTGAGTTGATGTCTCGAAGAAAGGATTGGCTTATTGTCTATACTGATAATGAGGGTGACATGATGCTTGTTGGGGATGATCCATGGCAGGAGTTCTGTGCCATGGAATGA 2415 0.4853 MASSEVSIKDCVNGKGESYSSGYNNLNDARNAKEGPNAQSSALRDAEAALYRELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVADQHMPVYDLPSKILCRVINVMLKAEPDTDEVFAQVTLLPESNQDESAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTKQPPTQELAAKDLHGTEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGGNGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPAEFIVPYDQYMESLKYNYTIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPNRWAKSKWRCLQVRWDESSNITRPERVSPWKIEPALAPPALHPLPMPRPKRPRTNVVPLSPDSSVLTREASSKVSVDPSPANGLSRVLQGQELSTLRGNFVESNESDAAEKSVVWPPAVDDEKIDMVSTSRRYGSERWMSMGRHEPTCTDLLSGFGAGGDSSRPPLVDQTGPVASPARKHSLDHEGKFNVLASPWPVMPSSLSLNLLDSNVKGSVHGGDVSYQAPGNVRYGAFGDYPVLHGHKVHHLNGNLLMPPPPTTQYDSPRSRELRRKPVSAQTCEAVKPKDGDCKLFGFSLIGGPITPEPSVSQRNVTSESPGHMHLSSHQSHTFESGQKSEQSSSSKQTDVLVAVDDQENPLQACQTHMKDVQAKPHGGSARSCTKVHKKGIALGRSVDLTKFSNYVELVAELDQLFEFGGELMSRRKDWLIVYTDNEGDMMLVGDDPWQEFCAME 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0491 804 FunFam Auxin response factor 154 258 - -
Glsi02g0491 804 Pfam AUX/IAA family 775 801 IPR033389 -
Glsi02g0491 804 Pfam Auxin response factor 282 364 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Glsi02g0491 804 Gene3D - 153 258 IPR015300 -
Glsi02g0491 804 FunFam Auxin response factor 319 391 - -
Glsi02g0491 804 Pfam B3 DNA binding domain 156 257 IPR003340 GO:0003677
Glsi02g0491 804 CDD B3_DNA 154 256 IPR003340 GO:0003677
Glsi02g0491 804 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 49 803 IPR044835 GO:0003677|GO:0006355|GO:0009725
Glsi02g0491 804 SUPERFAMILY CAD & PB1 domains 733 802 - -
Glsi02g0491 804 ProSiteProfiles PB1 domain profile. 730 804 IPR000270 GO:0005515
Glsi02g0491 804 MobiDBLite consensus disorder prediction 654 697 - -
Glsi02g0491 804 MobiDBLite consensus disorder prediction 391 406 - -
Glsi02g0491 804 Gene3D - 726 804 - -
Glsi02g0491 804 SMART B3_2 156 258 IPR003340 GO:0003677
Glsi02g0491 804 MobiDBLite consensus disorder prediction 601 629 - -
Glsi02g0491 804 SUPERFAMILY DNA-binding pseudobarrel domain 152 285 IPR015300 -
Glsi02g0491 804 ProSiteProfiles B3 DNA-binding domain profile. 156 258 IPR003340 GO:0003677
Glsi02g0491 804 Gene3D - 319 389 - -
Glsi02g0491 804 MobiDBLite consensus disorder prediction 391 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0491 Glsi-ChrGlsi02 3163207 3167484 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0491 1 803 B3 DNA Binding Superfamily AT5G62000 65.170 0.0 1046
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Glsi02g0491 B3 1.6e-20 CL0405