Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0482 ATGTCGGCCATGGTTTCAGCCCTTGCTCAAGTCATTGGCGGCAGTGGCCACGAACAAGACCCTTTAACCGTGTCCCACTCCGCTGTACCTCAAAATAATGAACCATCCCAACCACCGCAAGATCAAGGGAACATCAGAAGAAGACACTACAGAGGAGTGAGGCAAAGGCCATGGGGAAAGTGGGCCGCTGAGATTCGTGATCCGAAGAAGGCAGCTAGAGTTTGGCTTGGAACCTTCGAGACTGCCGAGGCTGCTGCACTTGCATACGATGAAGCTGCTCTCAGATTCAAAGGCAGCAAAGCTAAGCTCAACTTTCCTGAAAAGGTTCAAGGCACTGGGGAATTTGGTTACCTTACAAATCGTCCAGAGTTTCACGAACAACCTCCTAACCCACTTCCTACTCTTGCTCCTCCTCCTCCCCCCAATTTCTCTCAGCATCAAACTTATTCAACTCCATATCCATATCCACAGATTCCGGGCAATTATGCTATGCCTCGTAATTTCTATGGGAGAGACATGTATGTTTCTTCTCAACCCTTTTCAGCCGTGTCTTCGTCTTCATCCTCATCTTCTGGACTGTCCCAGCAACAACAAGAAGAACTTCTAAGGTTTTCCATGCAATTTGGAGGCTCTTCTTCTAGTTCTGATCCTCCGAGGAATTGGACACATGATTATGATGGTAAAAGTTGA 690 0.4768 MSAMVSALAQVIGGSGHEQDPLTVSHSAVPQNNEPSQPPQDQGNIRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEAAALAYDEAALRFKGSKAKLNFPEKVQGTGEFGYLTNRPEFHEQPPNPLPTLAPPPPPNFSQHQTYSTPYPYPQIPGNYAMPRNFYGRDMYVSSQPFSAVSSSSSSSSGLSQQQQEELLRFSMQFGGSSSSSDPPRNWTHDYDGKS 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0482 229 MobiDBLite consensus disorder prediction 126 145 - -
Glsi02g0482 229 PRINTS Ethylene responsive element binding protein signature 72 88 IPR001471 GO:0003700|GO:0006355
Glsi02g0482 229 PRINTS Ethylene responsive element binding protein signature 50 61 IPR001471 GO:0003700|GO:0006355
Glsi02g0482 229 Pfam AP2 domain 49 98 IPR001471 GO:0003700|GO:0006355
Glsi02g0482 229 MobiDBLite consensus disorder prediction 114 155 - -
Glsi02g0482 229 PANTHER DNA-BINDING DOMAIN 32 196 IPR044808 GO:0003700|GO:0009873
Glsi02g0482 229 SMART rav1_2 49 112 IPR001471 GO:0003700|GO:0006355
Glsi02g0482 229 MobiDBLite consensus disorder prediction 20 43 - -
Glsi02g0482 229 CDD AP2 49 107 IPR001471 GO:0003700|GO:0006355
Glsi02g0482 229 MobiDBLite consensus disorder prediction 180 220 - -
Glsi02g0482 229 ProSiteProfiles AP2/ERF domain profile. 49 106 IPR001471 GO:0003700|GO:0006355
Glsi02g0482 229 MobiDBLite consensus disorder prediction 180 229 - -
Glsi02g0482 229 SUPERFAMILY DNA-binding domain 49 107 IPR016177 GO:0003677
Glsi02g0482 229 MobiDBLite consensus disorder prediction 15 53 - -
Glsi02g0482 229 Gene3D AP2/ERF domain 48 108 IPR036955 GO:0003700|GO:0006355
Glsi02g0482 229 FunFam Ethylene-responsive transcription factor 2 48 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0482 Glsi-ChrGlsi02 3071301 3072363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0482 1 146 AP2-EREBP Transcription Factor Family AT5G61890 56.494 9.40e-51 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Glsi02g0482 AP2 2.5e-14 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g0482 02 3071301 3072363 Glsi02g0482 02 3071301 3072363 ECH