Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0481 ATGGATCCAGACGCATTCACCAACAGCATTTTTAAGTGGGACCCTCGCGCCATTATTTCAACCGCCACACTTAACCGGCCCCCGCTTCTGGAGTACACAATGGCTCCACCGGCGCCGCCGACGGCCGCCATGGCCGCGTATCCAGTGAGGGCTTCGAGGGAGCTTGGAGGGCTGGACGAGTTGTTCCAAGCTTATGGGATCAGGTACTACACGGTGGCCAGAATAGCGGAGCTTGGGTTCACGGTGAGTACACTTGTGAACATGAAGGACGAGGAACTGGACGACATGATGAACAGCCTGTCCCAGATTTTTCGTTGGGATCTGCTGGTTGGGGAGCGGTACGGTATTAAAGCTGCCGTGAGAGCGGAGCGAAGACGCATAGACGAGGAGGATACGAGGCGTCGCAACCTTCTCACGGGGGATAACACCACCACCACCAACGCACTCGATGCTCTGTCCCATGAAGGGTTGTCGGAAGAACCAGTAGTGCAGCAAGAAAAAGAGGCGGTGGGAAGCGGGGGAGGGAGCACGTGGGAGGTGGTTGCTGCGGCGGAGAGGAGGAAGCAGCAGCAGAGGAGGAAACGGAGGAGCAGGACCAAGAAAAGTCATCATAATGGTGATAATGAGAATGAGGATCAAGAAGAGGAGGAAGGAGAAGAGAACGAGGAAGGGCACAATAATATTATGAATAGCGGTGGTGGTGGAGGGGGATGCGAGAGACAGAGGGAGCACCCATTCATCGTGACGGAGCCTGGGGAAGTAGCACGTGGGAAGAAGAACGGCCTCGATTATCTCTTCCACCTCTACGAGCAATGCCGCGAGTTCTTGATCCAAGTCCAGAACATCGCCAAGGAGCGCGGCGAGAAATGCCCCACCAAGGTGACAAACCAGGTGTTTAGGTACGCGAAGAAGGCAGGAGCGAGCTACATAAACAAGCCCAAAATGCGACACTACGTGCACTGCTATGCTTTGCATTGTCTGGACGAGGAGGCGTCGAATGAGCTGAGAATGGGGTTCAAGGAGAGAGGGGAGAACGTTGGGGCGTGGAGGCTAGCTTGCTATAAGCCCCTTGTGGCCATCGCAGCACGTCAAGGTTGGGACATCGATGCCATCTTCAATGCACATCCTCGTCTTTCTATATGGTATGTCCCGACCAAGCTCCGTCAACTTTGTCACGCCGAAAGGAACAGCGCCGCCGCTTCCAGTTCTGTCTCTCTAGGGAGTGGTCACCTCCCTTTCTAA 1242 0.5523 MDPDAFTNSIFKWDPRAIISTATLNRPPLLEYTMAPPAPPTAAMAAYPVRASRELGGLDELFQAYGIRYYTVARIAELGFTVSTLVNMKDEELDDMMNSLSQIFRWDLLVGERYGIKAAVRAERRRIDEEDTRRRNLLTGDNTTTTNALDALSHEGLSEEPVVQQEKEAVGSGGGSTWEVVAAAERRKQQQRRKRRSRTKKSHHNGDNENEDQEEEEGEENEEGHNNIMNSGGGGGGCERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLIQVQNIAKERGEKCPTKVTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEEASNELRMGFKERGENVGAWRLACYKPLVAIAARQGWDIDAIFNAHPRLSIWYVPTKLRQLCHAERNSAAASSSVSLGSGHLPF 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0481 413 PANTHER PROTEIN LEAFY 1 412 IPR002910 GO:0003677|GO:0006355
Glsi02g0481 413 Pfam DNA Binding Domain (C-terminal) Leafy/Floricaula 233 399 IPR035209 GO:0003677
Glsi02g0481 413 MobiDBLite consensus disorder prediction 154 241 - -
Glsi02g0481 413 Pfam Floricaula / Leafy protein SAM domain 54 131 IPR035079 -
Glsi02g0481 413 Gene3D Protein LEAFY 236 405 IPR038276 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0481 Glsi-ChrGlsi02 3063369 3065337 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0481 1 407 Orphan Transcription Factor Family AT5G61850 61.520 4.56e-157 448
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LFY Glsi02g0481 C_LFY_FLO 2.1e-108 CL0123