Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0447 ATGCAAATGCTAATGACGCTGATCCAATTCAAAGCTTTTTTTGGACCCGCGTCCAATGGGCCTCACGTGCCTGAGAGGTCACTGGCCTTGGAAAAAAGTACATCGGGTGGCGGTGCAATGTCAAGTTTTACTGTCGGTGGCAAGGTTGTGGATAGAGTTGATATATTGAGGAAGAGGCAATGGCCATGGCGATTGGACGTTTGGCCTTTTGCTATTATATATGCTGTGTGGCTAACTACAATTCTTCCTAGCTTAGACATTGTGGATGCTGCTATTGTATTGGGTGGCCTTGTTGCTCTTCACATTCTGGTTTGGCTGTTCACGGGTTGGTCGGTTGATTTCAGATGTTTTGCCCATTATAGCAAGGCTAAAAATATTCACGATGCTGATGCATGCAAAATAAATCCAGCTCAGTTTTCGGGTTCTAAAGAAGTTGTGCCACTTTATTCTCGAAAAGCACCTGTAGCTTCTTCATTGGTGGCAGATCCAGAAGAGATTTACTTCGATTTCAGAAAACAGCGTTTCGTCTATTCAAAGGAGAAGGGGACGTTTTGCAAGCTTTCTTACCCTACGAAGGAAACATTTGGATATTATCTTAAAAGTACTGGTCATGGCTCTGAAGCTAAAGTTCTTGCTGCCATTGAGAAATGGGGGCGGAATGTATTTGATTATCCTCAACCTACATTTCAGAAATTGTTGAAAGAGCACTGCATGGAGCCTTTTTTTGTATTTCAGGTTTTCTGTGTTGGTCTCTGGTGTTTGGATGAATATTGGTATTACAGTTTGTTCACTCTATTTATGTTGTTTATGTTTGAGTCAACGATGGCAAAAAGTCGGTTGAAGACTCTTACCGAGTTAAGACGTGTTACTGTGGATAGCCAGACCTTAATGGTACATCGCTGTGGCAAGTGGGTAAAACTCTCTGGCACCGATCTTTTGCCTGGGGATGTTGTCTCTATTGGACGATCTTCAGGTCATAATGGAGAAGAGAAGTCTGTACCTGCAGACATGCTTATATTGGCTGGAAGTGCAATTGTGAATGAAGCGATACTGACAGGCGAGTCTACACCTCAGTGGAAGGTTTCAATCATGGGTAAGGGGATTGAGGAGAAGTTGTCAGCAAGGCGAGATAAAAGCCATGTCTTATTTGGCGGGACTAAAATATTGCAGCACACACCAGATAAGACTTTTCCTCTGAAAACGCCTGATGGTGGCTGCTTGGCTGTTGTCTTGAGAACGGGGTTTGAAACAAGTCAAGGAAAGTTGATGCGGACAATTTTATTCTCTACAGAAAGGGTGACTGCCAATAGCTGGGAAAGTGGGCTGTTCATTTTATTCTTGGTAGTGTTTGCTTTAATTGCTGCTGGTTATGTGCTTATGAAGGGGCTTGAAGATCCCACAAGGAGCAAGTATAAACTTTTACTAAGCTGTTCGCTTATTATCACTTCTGTGATACCTCCTGAGTTACCAATGGAATTATCAATAGCTGTTAATACTTCTCTGATTGCACTGGCACGGCGTGGAATTTTTTGTACGGAACCTTTCCGAATACCATTTGCTGGGAAGGTTGATATATGTTGTTTTGACAAGACTGGAACTCTTACATCTGATGACATGGAGTTTTCTGGAGTTGTTGGCCTGGCAGGAACTACAGAATTAGAATCTGATATGAACAGAGTGCCAGCACGTACACTAGAAATTCTGGCTTCTTGCCATGCGTTGGTGTTTGTTGACAATAAGCTGGTTGGCGATCCTCTTGAGAAGGCATCACTAAAGGGAATAGATTGGAGTTATAAATCTGATGAGAAGGCTGTTCCAAAAAAGGGGAATGGCCATCCTGTGCAAATTGTTCAGCGACACCATTTTGCTTCTCACTTAAAACGAATGGCAGTTGTTGTTCGCATTCAAGAGGAGTTTTTTGCCTTTGTGAAGGGTGCCCCAGAAATTATTCAAGATAGGCTTACTGATATACCACCATCATACGTTGAAACCTACAAAAAATTTACACGTCAGGGATCCCGTGTTCTTGCCCTTGCTTACAAGTCTCTTCCAGACATGACAGTCAGTGAGGCTAGAAGCTTGGATAGGGATATTGTGGAGAGTGGACTTACTTTTGCAGGTTTTGTGGTATTTAATTGTCCCATTAGATCGGATTCTGCCTCTATTTTATCTGAATTGAAAGGATCGTCACATGACTTGGTGATGATTACTGGTGACCAAGCTTTGACGGCTTGCCATGTTGCTAGTCAAGTTCATATAATATCAAAACCTACATTAATTCTTGGTCCAGCAGGTAATGGTGAAGGGTATAATTGGGTCTCCCCTGATGAGACTGAAATAGTCCACTACAGTGTGAAAGAGGTCGAAACTTTATCAGAAACTCATGATCTCTGTATTGGAGGTGATTGCATTGAGATGTTACAACAAACGTCTAGTACTCTACTGGTCATTCCGCATGTGAAGGTTTTTGCCAGAGTGGCTCCTGAGCAAAAAGAACTTATCATGACCACTTTTAAAACAGTAGGAAGGATGACTTTGATGTGTGGGGATGGAACCAATGATGTTGGAGCTTTGAAGCAGGCCCATGTAGGGGTTGCTCTTCTGAACGCATTGCATCCAACTCAAAGTGGAAACACCTCTTCAGACTCATCTAAGGAAGAAGGTACCAAGTCTATAAAGCCAAAGAAATCCAAGGCTTCATTGGATGCATCTGGAAAAACAATTAGCCCTATTGGAGAAGGCACTTCAAAAGCCAAAGTTTCTTCAAGATTGGATTCCACCAGTCACTCATCTAGTAACCGTCATCTGACAGCTGCAGAGATGCAACGGCAGAAGCTTAAGAAGATGATTGATGAGCTTAATGAGGAAGGAGATGGTCGCGCAGCTCCTGTAGTCAAGCTTGGTGATGCCTCAATGGCGTCCCCATTCACTGCAAAGCATGCATCTGTTGCTCCCACCACTGACATAATTCGTCAAGGTCGCAGTACACTAGTGACTACGCTCCAGATGTTTAAAATTCTGGGCCTAAATTGCCTTGCTACTGCTTATGTGTTGAGTGTTATGAATTTGGATGGTGTCAAGCTAGGTGATGTTCAAGCTACGATAAGTGGAGTCTTTACTGCTGCCTTTTTCCTTTTTATCTCACATGCCCGCCCACTTCCCACCCTTTCAGCTGAACGTCCTCACCCCAATGTTTTTTCCTCTTATCTCTTACTTTCTCTCTTAGGACAGTTTGCAATTCACCTGTTTTTTCTGATTTCTTCTGTTAAAGAGGCTGAGAAATACATGCCAGATGAATGCATAGAACCAGACTCTGATTTTCATCCCAACCTGGTGAATACTGTTTCCTACATGGTGAGCATGATGCTTCAGGTGGCCACTTTTGCTGTGAACTATATGGGTCATCCTTTCAACCAGAGCATTTCTGAAAACAAACCGTTCCGGTATGCGCTTATTGCTGCTGTTGGTTTCTTCACAGTGATTACATCTGATCTCTTCAGGGACTTAAATGACGGGTTGAAGTTGGTTCCATTGCCCGTCGAATTAAGGGATAAACTGTTGATTTGGGCTGCTCTTATGTTTTTGACCTGCTATTCATGGGAGAGAATATTAAGATGGGCTTTCCCTGGTAGGTTTCCAGCTAGGAAGATGCGACAACGTCATGCTGCATCCAACTTTGAAAAGAAGAAACAGGTCTAA 3699 0.4296 MQMLMTLIQFKAFFGPASNGPHVPERSLALEKSTSGGGAMSSFTVGGKVVDRVDILRKRQWPWRLDVWPFAIIYAVWLTTILPSLDIVDAAIVLGGLVALHILVWLFTGWSVDFRCFAHYSKAKNIHDADACKINPAQFSGSKEVVPLYSRKAPVASSLVADPEEIYFDFRKQRFVYSKEKGTFCKLSYPTKETFGYYLKSTGHGSEAKVLAAIEKWGRNVFDYPQPTFQKLLKEHCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKTLTELRRVTVDSQTLMVHRCGKWVKLSGTDLLPGDVVSIGRSSGHNGEEKSVPADMLILAGSAIVNEAILTGESTPQWKVSIMGKGIEEKLSARRDKSHVLFGGTKILQHTPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFALIAAGYVLMKGLEDPTRSKYKLLLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDICCFDKTGTLTSDDMEFSGVVGLAGTTELESDMNRVPARTLEILASCHALVFVDNKLVGDPLEKASLKGIDWSYKSDEKAVPKKGNGHPVQIVQRHHFASHLKRMAVVVRIQEEFFAFVKGAPEIIQDRLTDIPPSYVETYKKFTRQGSRVLALAYKSLPDMTVSEARSLDRDIVESGLTFAGFVVFNCPIRSDSASILSELKGSSHDLVMITGDQALTACHVASQVHIISKPTLILGPAGNGEGYNWVSPDETEIVHYSVKEVETLSETHDLCIGGDCIEMLQQTSSTLLVIPHVKVFARVAPEQKELIMTTFKTVGRMTLMCGDGTNDVGALKQAHVGVALLNALHPTQSGNTSSDSSKEEGTKSIKPKKSKASLDASGKTISPIGEGTSKAKVSSRLDSTSHSSSNRHLTAAEMQRQKLKKMIDELNEEGDGRAAPVVKLGDASMASPFTAKHASVAPTTDIIRQGRSTLVTTLQMFKILGLNCLATAYVLSVMNLDGVKLGDVQATISGVFTAAFFLFISHARPLPTLSAERPHPNVFSSYLLLSLLGQFAIHLFFLISSVKEAEKYMPDECIEPDSDFHPNLVNTVSYMVSMMLQVATFAVNYMGHPFNQSISENKPFRYALIAAVGFFTVITSDLFRDLNDGLKLVPLPVELRDKLLIWAALMFLTCYSWERILRWAFPGRFPARKMRQRHAASNFEKKKQV 1232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0447 1232 Pfam E1-E2 ATPase 294 507 - -
Glsi02g0447 1232 SFLD Haloacid Dehalogenase 508 995 - -
Glsi02g0447 1232 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 533 717 IPR023299 GO:0000166
Glsi02g0447 1232 ProSitePatterns Hypothetical cof family signature 2. 848 870 - -
Glsi02g0447 1232 Gene3D - 263 427 - -
Glsi02g0447 1232 Pfam haloacid dehalogenase-like hydrolase 524 752 - -
Glsi02g0447 1232 PRINTS P-type cation-transporting ATPase superfamily signature 347 361 - -
Glsi02g0447 1232 PRINTS P-type cation-transporting ATPase superfamily signature 848 867 - -
Glsi02g0447 1232 PRINTS P-type cation-transporting ATPase superfamily signature 527 541 - -
Glsi02g0447 1232 PRINTS P-type cation-transporting ATPase superfamily signature 729 739 - -
Glsi02g0447 1232 CDD P-type_ATPase_cation 209 1147 IPR047820 -
Glsi02g0447 1232 SUPERFAMILY Calcium ATPase, transmembrane domain M 198 1209 IPR023298 -
Glsi02g0447 1232 Coils Coil 1229 1232 - -
Glsi02g0447 1232 FunFam Cation-transporting ATPase 523 707 - -
Glsi02g0447 1232 MobiDBLite consensus disorder prediction 872 938 - -
Glsi02g0447 1232 MobiDBLite consensus disorder prediction 886 900 - -
Glsi02g0447 1232 NCBIfam HAD-IC family P-type ATPase 442 546 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Glsi02g0447 1232 NCBIfam HAD-IC family P-type ATPase 819 867 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Glsi02g0447 1232 FunFam Cation-transporting ATPase 708 883 - -
Glsi02g0447 1232 SUPERFAMILY HAD-like 522 872 IPR036412 -
Glsi02g0447 1232 NCBIfam P-type ATPase of unknown pump specificity (type V) 78 1189 IPR006544 GO:0006812|GO:0016020|GO:0019829|GO:0140358
Glsi02g0447 1232 ProSitePatterns E1-E2 ATPases phosphorylation site. 529 535 IPR018303 -
Glsi02g0447 1232 Gene3D - 708 884 IPR023214 -
Glsi02g0447 1232 FunFam Cation-transporting ATPase 265 427 - -
Glsi02g0447 1232 PANTHER CATION-TRANSPORTING ATPASE-RELATED 52 1208 IPR006544 GO:0006812|GO:0016020|GO:0019829|GO:0140358
Glsi02g0447 1232 MobiDBLite consensus disorder prediction 909 938 - -
Glsi02g0447 1232 SFLD p-type atpase 508 995 IPR044492 -
Glsi02g0447 1232 Coils Coil 936 956 - -
Glsi02g0447 1232 Gene3D - 522 707 IPR023299 GO:0000166
Glsi02g0447 1232 SUPERFAMILY Calcium ATPase, transduction domain A 294 426 IPR008250 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0447 40 1232 Primary Pumps ATPases AT5G23630 77.657 0.0 1920