Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0433 ATGCAGGATGCACGTTATCGGAACTCAAAAAGGTGCAAAAGAGTGCTTCATGGGACAAAGACAACCGTGAGGAGTTCTTTTTTTGTTGGCCAGATATCATGGAGTCTCGCACGTGCAGGAAAAGCTGGCTTTAACTTTGGAACTTTGGGCTGGGCTTCATATTGTCATCTCCATTGGGCCAGGTTGACCTTACTAGATTCCAGTGTCAATATGGCCTCTGCTCTATTTCGTAGGAGAATCACCCAGAATCCCCGCTGCTTCAAGTTGCCTCCTTCTTGGTGCTTGAGTAATCTATTGTCTCACCATTCCACGATTCACGAAGCTGTGGGTGAAGATGCTATTCACAGCGTTCCAAAGGGCGTTTCGTTTCATTCCCACGTTGCTCCTGCTGGAGGACTGCCATCTTCTATGCGTGGATTTGTCTTTTGGGAACCCAACAAGCCCCTCACCATCGAGGAATTCCACATCCCCCGCCCCAAGGCCGGAGAAATTCTCATCAGAACCAAGGCATGTGGCGTATGCCACTCCGATCTCCACGTTATAAAAGGTGAAATTCCATTTTCCAGTCCTTGCGTGTTGGGGCACGAGATAACTGGTGAAGTTGTTGAACATGGACCCCTCACCTATAGCAAAATCATACAAAGGCTTCCTGTTGGATCTCGAGTTGTTGGATCCTTCATCATGCCTTGTGGCAGCTGTTCCTTCTGCTCAAAGGGCCATGACGATTTATGTGAAGATTTCTTTGCTTATAACCGGGCAAAAGGAACCCTTTATGATGGTGAAACTCGGCTGTTTCTTCGTAGCAGTGGAAAACCAATATTTATGTATAGTATGGGAGGGCTTGCCGAATACTGTGTTGTGCCAGCAAATGCGTTGTCAGTATTACCAGAATCATTGCCATATACGGAGTCTGCAATACTAGGATGTGCTGTGTTTACTGCATATGGTGCTATGGCCCATGCGGCTGAGGTGCGTCCTGGGGATTCTGTTGCTGTTATTGGAACTGGAGGCGTTGGTTCTAGTTGTTTGCAGATTGCTAGAGCATTTGGTGCCTCGGATATAATTGCTGTGGATGTTCAGGATGAAAAGCTGCAGAAAGCAAAAGCATTTGGTGCTACTCACACTGTAAATGCAGCACGAGAAGATCCCGTTGAAAAGATAATCGAAATAACTGGTGGAAAGGGTGTTGACGTTGCTGTGGAAGCCTTGGGGAAACCACAGACGTTTTCCCAGTGCACACAAAGTGTCAAAGATGGAGGAAAAGCTGTGATGATTGGACTAGCACAATCTGGTGCTGTAGGACAGATGGATATAAATCGTCTTGTTCGTAGAAAGATAAAAATTATTGGCTCATATGGAGGCAGGGCAAGGCAAGACCTTCCTAAGTTAGTCAGATTGGCAGAAACGGGGATCTTCAATCTTGACCATGCTGTTTCTAAAATATATAACTTTGAGGAGGCAGGCAAAGCATTCGAAGATCTAAACCAGGGAAGAATTGTCGGACGAGGTGTGGTTGAGATAATCTAG 1527 0.4623 MQDARYRNSKRCKRVLHGTKTTVRSSFFVGQISWSLARAGKAGFNFGTLGWASYCHLHWARLTLLDSSVNMASALFRRRITQNPRCFKLPPSWCLSNLLSHHSTIHEAVGEDAIHSVPKGVSFHSHVAPAGGLPSSMRGFVFWEPNKPLTIEEFHIPRPKAGEILIRTKACGVCHSDLHVIKGEIPFSSPCVLGHEITGEVVEHGPLTYSKIIQRLPVGSRVVGSFIMPCGSCSFCSKGHDDLCEDFFAYNRAKGTLYDGETRLFLRSSGKPIFMYSMGGLAEYCVVPANALSVLPESLPYTESAILGCAVFTAYGAMAHAAEVRPGDSVAVIGTGGVGSSCLQIARAFGASDIIAVDVQDEKLQKAKAFGATHTVNAAREDPVEKIIEITGGKGVDVAVEALGKPQTFSQCTQSVKDGGKAVMIGLAQSGAVGQMDINRLVRRKIKIIGSYGGRARQDLPKLVRLAETGIFNLDHAVSKIYNFEEAGKAFEDLNQGRIVGRGVVEII 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0433 508 Gene3D - 314 451 - -
Glsi02g0433 508 SMART PKS_ER_names_mod 144 505 IPR020843 GO:0016491
Glsi02g0433 508 SUPERFAMILY GroES-like 133 340 IPR011032 -
Glsi02g0433 508 PANTHER NAD-DEPENDENT ALCOHOL DEHYDROGENASE 137 505 - -
Glsi02g0433 508 FunFam Alcohol dehydrogenase (Zinc) 141 326 - -
Glsi02g0433 508 Pfam Alcohol dehydrogenase GroES-like domain 162 292 IPR013154 -
Glsi02g0433 508 CDD Zn_ADH10 137 506 - -
Glsi02g0433 508 Gene3D - 141 497 - -
Glsi02g0433 508 FunFam Sorbitol dehydrogenase 314 452 - -
Glsi02g0433 508 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 299 472 IPR036291 -
Glsi02g0433 508 Pfam Zinc-binding dehydrogenase 337 467 IPR013149 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0433 Glsi-ChrGlsi02 2792873 2798581 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0433 154 507 Monolignol Biosynthesis Gene Families AT4G37990 24.722 9.01e-18 83.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g0433 02 2792873 2798581 Glsi02g0433 02 2792873 2798581 ECH