Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0432 ATGCCTCTTTTGAGGAGAAAGCCTTTTGCCTTGGCTGAGCTACCTAAGGATTTGGAGTCACATGAGATTGTTTACCAAGTTCGATTTACAAAAGAAGTGTTCCGAGATTATCATGATTATTTGAACCGTATAAATTTATATCGCCAGAGGACTTGGATGTGTAAAGTCACTGGGAAAACTAACTTGACTTATGAAGAGGCTTTGGTGTCAGAAAAACGTGCCACCGAAAAAGTTCAACAAATTCCCAAAGAATTAATGGCTCCTGCTCTGAGGATTATTCAGTACAGCTGGCTCCCTTTGAGGGATCTCGCCGACAAAATAGCTGAAAAATTGCAGGAACGATTATATGTGGGTGCTGAACTGTATGGAAAAAAGGATGGTGGTGTACATCCATGCAAAATATTGAAAGTCATGCAGGAAGGAGTTGAAAAATTCCATTATGAGGTAGCTTGGCTTGATGAAAACAAGAGTACAATTGAAAAGACAGAAGTTAGTGCAGAAAATTTGGTGCAGAAGAAGCTGCCCTTTAGCAGAAACATTTTGAAATCTTTTATCCGGGAATCTACATATCGGAATGCTCCTTGGGTACTACATGATGAGCTGGCACGAAATCATGGAATCTCAACTGATATCCCAGAGGAGTTAAGAGGAAGAGCTTTCTTCAAGAATGGACTTTTAATCTGCAACAAGAAAAGAAAGAACAAGGATTTAAAAGAAGAAACTGAAAATTGCAAAAGGAAGAAGTTGGACCAGGCGAAAATTGATGGTTCCACTTTAGTGAAAGAAAATGACCAATTTAAGGAACAACTTATCAAATATCCAATTGACGATCTATTGGTGCAGCCTAGTCCAGATGATCCTGTTTTCACCGATCGTCCTTCTCCATCTAAAGACTTCAATGTTCCAATTTTTTGTGTAGGCGATCTTTTAATGGTTTGGGATTTTTGTACTTCTTTTGGTAGGCTGTTGCACTTGAGCCCCTACTCTCTAGAAGATTTTGAAAATGCCATTTGCCACAAGGAAAGCAATGTGGTTCTCCTTGTGGAATCTCATGCAGCTCTTTTGCGGGTGCTCATCAAAGATGATGGTGAATACACTTTAGCTGTACAGAAAAGAAAGCGGAAGTTTAAGATTACAATGATTAGTTGGCAAGAGTATTTATGCGATTTTCTGGAAATGATCAATGTTCCTGGTTTACGGCAACATGAAGCCACCATAAAGCGGGGACATTATGGCCTTGTTGATGCCAATGTTAAATTAGAAATATTACATGAATTGGTCAATCTAGTCCTTGAAACTTCAATTTTCCGGGAAAAGTTGGATGAGTTTATTGAACAGCGGCAGGCACTTGGTGCTACTATAAGGGGAGAAGCACTGGAAGATGCTAGGAAGAGAAGAGAAGAAAAGGAGCAGTTGAAAGCTGAGTTTGACAGCAATGGTAGTATGGATGGGAACTGTCTAGAGAATGCAGCAAGCGTCTCAACAAACGATAATCACAATAGGCAAAATGGAAACATAGAAAAGAAAAGAAATGGAGAGATAGAACCCTTTAGGCAAAAAGATGCATTGGTTGGAAGTGTGATCAAGCACCATTCAAACTGTGCATCAAAAAAGAAATCTAAGAGGCTGAGCTTAGAACTGAAAGAACCAGCAGAAAATGGGAAAGAATTATATCAAAAGGAATTACGGAAGCAAGTGAAGGGGTCAGAGAAGAGTAGTAAAGAACAGAGGGTGCAACCTATCAGGGAATATTTTGAACGGGAGATAGAGAAACGGTTTATTCGTACAAGCCCTTTAGGTAAAGACAAGCATTACAATAGGTATTGGTGGTTCCGTCGTGATGGGAGGATATTTGTGGAAAGTTCTGACTCCAAGGAGTGGGGCTACTACAGCTGTAAGGAAGAGCTTGATGCATTGATGGGTTCACTGAATCCTAAGGGTGAGCGGGAAAGGGCACTGCACAAACAACTGGCAAAATATTATAGTAGAATATGTTCGGAACTTCAAAAGAGATCAAAGGATCTGTTACATATGGCACTGGATGAGTCTGTCCTCCGAAGGTCTACTCGTGTTCGAGCCCCACCTAGGGAAAATCCTGCCAATGCTTTCCTCAGATATGTTAACAAGTGGAAGGAAGAGTAG 2142 0.4043 MPLLRRKPFALAELPKDLESHEIVYQVRFTKEVFRDYHDYLNRINLYRQRTWMCKVTGKTNLTYEEALVSEKRATEKVQQIPKELMAPALRIIQYSWLPLRDLADKIAEKLQERLYVGAELYGKKDGGVHPCKILKVMQEGVEKFHYEVAWLDENKSTIEKTEVSAENLVQKKLPFSRNILKSFIRESTYRNAPWVLHDELARNHGISTDIPEELRGRAFFKNGLLICNKKRKNKDLKEETENCKRKKLDQAKIDGSTLVKENDQFKEQLIKYPIDDLLVQPSPDDPVFTDRPSPSKDFNVPIFCVGDLLMVWDFCTSFGRLLHLSPYSLEDFENAICHKESNVVLLVESHAALLRVLIKDDGEYTLAVQKRKRKFKITMISWQEYLCDFLEMINVPGLRQHEATIKRGHYGLVDANVKLEILHELVNLVLETSIFREKLDEFIEQRQALGATIRGEALEDARKRREEKEQLKAEFDSNGSMDGNCLENAASVSTNDNHNRQNGNIEKKRNGEIEPFRQKDALVGSVIKHHSNCASKKKSKRLSLELKEPAENGKELYQKELRKQVKGSEKSSKEQRVQPIREYFEREIEKRFIRTSPLGKDKHYNRYWWFRRDGRIFVESSDSKEWGYYSCKEELDALMGSLNPKGERERALHKQLAKYYSRICSELQKRSKDLLHMALDESVLRRSTRVRAPPRENPANAFLRYVNKWKEE 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0432 713 MobiDBLite consensus disorder prediction 482 501 - -
Glsi02g0432 713 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 594 660 IPR028941 -
Glsi02g0432 713 PANTHER BROMODOMAIN ADJACENT TO ZINC FINGER DOMAIN, 2A 1 711 - -
Glsi02g0432 713 ProSiteProfiles WAC domain profile. 22 127 IPR013136 -
Glsi02g0432 713 MobiDBLite consensus disorder prediction 470 514 - -
Glsi02g0432 713 Coils Coil 455 479 - -
Glsi02g0432 713 SMART testlast3 303 364 IPR018501 -
Glsi02g0432 713 Coils Coil 230 250 - -
Glsi02g0432 713 ProSiteProfiles DDT domain profile. 303 364 IPR018501 -
Glsi02g0432 713 Pfam ATP-utilising chromatin assembly and remodelling N-terminal 24 120 IPR013136 -
Glsi02g0432 713 Pfam DDT domain 305 361 IPR018501 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0432 Glsi-ChrGlsi02 2785709 2791617 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0432 409 659 Homeobox Transcription Factor Family AT5G44180 27.203 1.03e-09 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Glsi02g0432 WAC_Acf1_DNA_bd 5.1e-28 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g0432 02 2785709 2791617 Glsi02g0432 02 2785709 2791617 ECH