Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0429 ATGGCCGCAGAAATTTGTTGTGGTTCTCTACTCTTATCCTGTGAAACTCAGTTGCACCATCAACGGCATGGTCGACGAACCAGAACTACAAGAACAAGTAGTAAATTGCAGTTTTCATCACCGCTTTCACTTCCTCCACCCGAAGCTTCCTTTTCTTCTTCTTTATCTAAACATGGTTCCTTCTCCAGAACCTTTCACCCCAAGAGGTTCAGAGTGTTCTGCCAGGTTGCTGGCCTCTACGACCTCGAATTCGCCGTCAAAGTTGGCCAGGACCGTCTCTCTAAGGTCCCTATCTCTAATATAAGGAATTTCAGCATCATTGCTCATATTGACCATGGGAAATCAACCTTAGCCGATAAATTGCTTCAAATGACTGGTACTGTTCAGCAGCGAGAAATGAAGGATCAGTTTCTCGATAACATGGATTTAGAGAGAGAAAGAGGCATCACAATTAAGCTACAGGCAGCTCGAATGCGTTATGTGTTTGAAAATGAACCATATTGCTTGAATCTAATTGATACTCCGGGGCATGTTGACTTCTCTTATGAGGTTTCTCGATCACTAGCTGCATGTGAGGGTGCTCTTCTTGTTGTAGATGCTTCTCAGGGAGTTGAAGCACAAACTCTAGCTAATGTTTATTTGGCCTTGGAGAACAATCTAGAAGTTATCCCTGTTTTAAACAAAATAGATCTTCCAGGTGCTGAACCGGATCGAGTTATTAAGGAGATTGAAGAGATTGTTGGGTTAGATTGTAGCAATGCAATTCTCTGCTCTGCAAAGGAAGGAATTGGTATAACTGATATTCTCAATGCAATTGTTACAAGAATTCCCCCACCTGCTGATACAGCAGAAAGGCCATTGAGGGCTCTAATTTTTGATAGTTACTATGATCCATATAGGGGTGTTATTGTATACTTTCGAGTTGTAGATGGGACTATAAAGAAAGGTGACAGAGTTTATTTTATGGCTAGTGGAAAGGATTATTTTGCTGATGAAATTGGAGTTTTGTCTCCCAATCAACTCCAAGTTGAAGAGTTGTATGCGGGTGAGGTGGGCTATCTTTCAGCATCTATAAGGACAGTAGCTGATGCTCGGGTGGGTGACACCATTACTCACTATGGCAGACAGGCGGAGAACTCACTCCCTGGATATGAGGAAGCCACTCCAATGGTGTTTTGTGGCCTATTTCCTGTTGATGCAGACCAATTTCCTGAGCTGCGTGATGCACTTGAGAAGCTACAGCTCAATGATGCTGCACTGAAGTTTGAACCTGAGACCTCAAGTGCCATGGGATTTGGCTTTCGATGTGGGTTTCTTGGACTTCTCCATATGGAAATTGTTCAGGAAAGACTTGAGAGAGAATACAATCTGAGTTTGATAACAACCGCTCCAAGTGTTGTATATAGAGTGAACTGTGTAGAGGGTGATACTGTTGAATGCTCAAACCCATCTTTACTCCCTGAACCTGGAAAAAGGAAGTCAATTGAGGAGCCATTTGTTAAGATTGAGATGCTTACACCAAAGGAATACATTGGTCCACTTATGGAACTGGCACAAGAAAGAAGAGGGCAATTTAAAGAAATGAAATTTATCACTGAAAATAGAGCATCAATAATCTATGAATTACCATTAGCAGAGATGGTTGGTGATTTCTTTGACCAGTTAAAGTCAAGAAGTAAGGGTTATGCTAGCATGGAGTATACTTTCATTGGGTACAAAGAAAGTGATTTAATTAAACTTGACATACAGATAAATGGTGATCCTGTGGAACCATTGGCTACAATTGTTCACAAGGATAAGGCATATTCAGTAGGAAGGGCTTTGACTCAAAAGTTGAAAGAGCTCATACCACGTCAAATGTTTAAAGTACCTATTCAAGCGTGCATAGGTTCAAAAGTGATTGCTAGTGAATCCTTATCTGCAATAAGGAAGGATGTATTAGCCAAATGCTATGGTGGGGACATTTCAAGAAAAAAGAAATTACTTAAGAAACAGGCTGAAGGAAAGAAAAGGATGAAATCAATTGGTAAAGTTGACGTGCCTCAAGAAGCCTTCATGGCGGTTTTGAAACTTGAAAAGGAGGTGATATAA 2091 0.4099 MAAEICCGSLLLSCETQLHHQRHGRRTRTTRTSSKLQFSSPLSLPPPEASFSSSLSKHGSFSRTFHPKRFRVFCQVAGLYDLEFAVKVGQDRLSKVPISNIRNFSIIAHIDHGKSTLADKLLQMTGTVQQREMKDQFLDNMDLERERGITIKLQAARMRYVFENEPYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEVIPVLNKIDLPGAEPDRVIKEIEEIVGLDCSNAILCSAKEGIGITDILNAIVTRIPPPADTAERPLRALIFDSYYDPYRGVIVYFRVVDGTIKKGDRVYFMASGKDYFADEIGVLSPNQLQVEELYAGEVGYLSASIRTVADARVGDTITHYGRQAENSLPGYEEATPMVFCGLFPVDADQFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLSLITTAPSVVYRVNCVEGDTVECSNPSLLPEPGKRKSIEEPFVKIEMLTPKEYIGPLMELAQERRGQFKEMKFITENRASIIYELPLAEMVGDFFDQLKSRSKGYASMEYTFIGYKESDLIKLDIQINGDPVEPLATIVHKDKAYSVGRALTQKLKELIPRQMFKVPIQACIGSKVIASESLSAIRKDVLAKCYGGDISRKKKLLKKQAEGKKRMKSIGKVDVPQEAFMAVLKLEKEVI 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0429 696 FunFam Translation factor GUF1, mitochondrial 382 463 - -
Glsi02g0429 696 Pfam Elongation factor G C-terminus 495 580 IPR000640 -
Glsi02g0429 696 CDD EF4_III 389 464 - -
Glsi02g0429 696 MobiDBLite consensus disorder prediction 22 51 - -
Glsi02g0429 696 Pfam GTP-binding protein LepA C-terminus 584 690 IPR013842 -
Glsi02g0429 696 Hamap Translation factor GUF1 homolog, organellar chromatophore [lepA]. 93 693 IPR027518 -
Glsi02g0429 696 Gene3D - 98 281 IPR027417 -
Glsi02g0429 696 Hamap Elongation factor 4 [lepA]. 96 694 IPR006297 GO:0005525
Glsi02g0429 696 Gene3D - 576 650 IPR038363 -
Glsi02g0429 696 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 96 298 IPR027417 -
Glsi02g0429 696 Gene3D Translation factors 282 381 - -
Glsi02g0429 696 FunFam Elongation factor 4 98 281 - -
Glsi02g0429 696 FunFam Translation factor GUF1, mitochondrial 464 574 - -
Glsi02g0429 696 SMART EFG_C_a 494 582 IPR000640 -
Glsi02g0429 696 Pfam Elongation factor Tu GTP binding domain 100 277 IPR000795 GO:0003924|GO:0005525
Glsi02g0429 696 SUPERFAMILY EF-G C-terminal domain-like 388 466 IPR035647 -
Glsi02g0429 696 NCBIfam small GTP-binding protein domain 102 271 IPR005225 GO:0005525
Glsi02g0429 696 CDD EF4_II 287 372 - -
Glsi02g0429 696 SUPERFAMILY Translation proteins 261 383 IPR009000 -
Glsi02g0429 696 PRINTS GTP-binding elongation factor signature 186 197 IPR000795 GO:0003924|GO:0005525
Glsi02g0429 696 PRINTS GTP-binding elongation factor signature 103 116 IPR000795 GO:0003924|GO:0005525
Glsi02g0429 696 PRINTS GTP-binding elongation factor signature 222 231 IPR000795 GO:0003924|GO:0005525
Glsi02g0429 696 PRINTS GTP-binding elongation factor signature 146 154 IPR000795 GO:0003924|GO:0005525
Glsi02g0429 696 PRINTS GTP-binding elongation factor signature 170 180 IPR000795 GO:0003924|GO:0005525
Glsi02g0429 696 MobiDBLite consensus disorder prediction 31 51 - -
Glsi02g0429 696 NCBIfam translation elongation factor 4 100 691 IPR006297 GO:0005525
Glsi02g0429 696 CDD lepA_C 497 576 IPR035654 -
Glsi02g0429 696 Pfam Elongation factor Tu domain 2 301 371 IPR004161 GO:0005525
Glsi02g0429 696 Gene3D Elongation Factor G (Translational Gtpase), domain 3 382 463 - -
Glsi02g0429 696 FunFam Translation factor GUF1, mitochondrial 282 381 - -
Glsi02g0429 696 CDD LepA 102 279 - -
Glsi02g0429 696 PANTHER TRANSLATION FACTOR GUF1-RELATED 83 691 IPR006297 GO:0005525
Glsi02g0429 696 SUPERFAMILY EF-G C-terminal domain-like 495 590 IPR035647 -
Glsi02g0429 696 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 139 154 IPR031157 -
Glsi02g0429 696 FunFam Translation factor GUF1, mitochondrial 576 650 - -
Glsi02g0429 696 Gene3D - 464 575 - -
Glsi02g0429 696 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 99 280 IPR000795 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0429 Glsi-ChrGlsi02 2752473 2760776 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0429 101 334 Eukaryotic Initiation Factors Gene Family AT3G22980 31.984 1.22e-24 108