Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0367 ATGAAGAAACAAGGCTTTGAGGTTGAAGCCATAGGCATCAACTACAAGATCCGCACACAAAAAACAGAGCAACCTTTTAAAATCTTCAGCAAATCCCCACAAATGAATAGCGAAGAAAATGGGCAAGAACCAGAAAAGGAAGCAAAAGCTAGACAAACATGCAGTGGAGTCAAGCATGTCCTCAAGGACGTCAGCTGTCAAGCCAAGCCGTGGGAAATTCTCGCCATTGTAGGGCCAAGTGGAGCTGGAAAATCATCCCTGCTTGAGATTCTTGCTGGTAAAGTTACTCCACAAAGTGGGTCTATCTTACTGAACCAGAAACCTGTTGATAAACTTCAGTTCAGGAAGATTTCAGGGTATGTTACACAAAATGATACTCTGTTTCCCTTACTTACGGTTGAAGAAACCTTGATGTTTAGTGCAAAACTAAGGTTAAAGCTTCCTCAAGAGCAACTCGGCTCCCGGGTCAAGTCTCTGATTCAGGAACTAGGACTCGACCATGTTGCCAAGACTCGAATTGGAGACGACAGGGTCCGTGGGATATCTGGTGGTGAAAGACGCAGAGTTTCTATTGGTGTGGAAGTCATACACGATCCGAAAGTGCTGATTCTGGATGAACCAACTTCTGGGCTTGACAGTACCTCTGCTCTGCAAATCATCGATATGCTAAACGCCATGGCTGAATCAAGGGGCCGAACTATAATCCTAAGTATCCATCAACCTGGGTTCAGAATAGTAAAGTTGTTCGAGTCAATATTGTTGTTAGCCAGTGGCTCTGTGTTACACCATGGGACTGCGGATTTGCTGGGTGTGAATCTAAGATTAATGGGTTTTGATCTTCCTCTTCATGTTAACGTAGTTGAATTTGCCATTGAGTCCATAGAAACCATTCAGCAACAGCAAAAATGTCAGCAAATTCAACTAGAAACGCCACCTCAATTGCCAGCAACAATGCAACAAAAGAAAGGTGATGATCAAGGTAAGAGTAGAAGTGGTAAGTGTACTCTGCAGCAGCTCTTTCAACAATCCAAGGTAATTGATGAAGATATCATCAATGCGGGAATAAATTTCACCTGTGATTTTGCAAATTCTAGATTGAGAGAAACTATGATTCTCTGTCATAGGTTCTCCAAAAACATCTTTCGTACAAAGGAGCTCTTTGCATGTAGAACGATTCAGATGCTGATTTCCGGATTCGTTTTGGGCTCCATCTTTTGTAATCTCAAGGATGATCTAGCGGGAGCTGAAGAAAGGGTAGGTCTATTTGCTTTCATATTAACATTTTTGTTATCAAGCACCATAGAAGCTCTGCCAATTTTCCTGCAAGAAAGGGAGATTTTGATGAAGGAGACATCTTGTGGAAGCTACAGAGTATCATCCTATGCTATTGCCAATGGCCTAGTTTACTTGCCATTTCTACTCATCCTAGCCATTTTATTCACAATGCCTTTATACTGGCTTGTGGGGCTCAACCGGAGTTTCACAGCTTTTCTGCACTTTTTGTTGCTAATTTGGTTAATTCTTTACACGGCAAATTCAGTTGTGGTGTGTTTCAGTGCTCTGGTGCCTAATTTCATTGTTGGGAACTCAGTGATCGCTGGTGTCATGGGGTCATTCTTCTTGTTCTCTGGCTACTTTATATCAAAACATGAAATTCCAAATTACTGGATTTTCATGCATTATATGTCTCTATTTAAGTATCCCTTCGAAGGGTTTCTGATGAATGAGTTCTCCAACTCAGGTAAGTGCTTGCAGTACCTGTTTGGGGCATGTGCGGTGACAGGAGAGGATGTGCTTAAAGAAGAAGGATATGGGGACGAAAGTAGTAAATGGAAGAATGTTGGGGTCATGGTCTGCTTCATCATGATTTACAGGTTCATTTCTTATGCAATTCTTAGATATAAATGCTCGCTGAAGGGATTTAATAGTGTCATCATCTAA 1941 0.4173 MKKQGFEVEAIGINYKIRTQKTEQPFKIFSKSPQMNSEENGQEPEKEAKARQTCSGVKHVLKDVSCQAKPWEILAIVGPSGAGKSSLLEILAGKVTPQSGSILLNQKPVDKLQFRKISGYVTQNDTLFPLLTVEETLMFSAKLRLKLPQEQLGSRVKSLIQELGLDHVAKTRIGDDRVRGISGGERRRVSIGVEVIHDPKVLILDEPTSGLDSTSALQIIDMLNAMAESRGRTIILSIHQPGFRIVKLFESILLLASGSVLHHGTADLLGVNLRLMGFDLPLHVNVVEFAIESIETIQQQQKCQQIQLETPPQLPATMQQKKGDDQGKSRSGKCTLQQLFQQSKVIDEDIINAGINFTCDFANSRLRETMILCHRFSKNIFRTKELFACRTIQMLISGFVLGSIFCNLKDDLAGAEERVGLFAFILTFLLSSTIEALPIFLQEREILMKETSCGSYRVSSYAIANGLVYLPFLLILAILFTMPLYWLVGLNRSFTAFLHFLLLIWLILYTANSVVVCFSALVPNFIVGNSVIAGVMGSFFLFSGYFISKHEIPNYWIFMHYMSLFKYPFEGFLMNEFSNSGKCLQYLFGACAVTGEDVLKEEGYGDESSKWKNVGVMVCFIMIYRFISYAILRYKCSLKGFNSVII 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0367 646 SMART AAA_5 70 267 IPR003593 GO:0016887
Glsi02g0367 646 ProSitePatterns ABC transporters family signature. 181 195 IPR017871 GO:0005524|GO:0016887
Glsi02g0367 646 Pfam ABC transporter 61 209 IPR003439 GO:0005524
Glsi02g0367 646 Pfam ABC-2 type transporter 369 577 IPR013525 GO:0016020|GO:0140359
Glsi02g0367 646 FunFam ABC transporter G family member 5 46 306 - -
Glsi02g0367 646 Gene3D - 47 363 IPR027417 -
Glsi02g0367 646 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 45 282 IPR003439 GO:0005524
Glsi02g0367 646 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 18 626 - -
Glsi02g0367 646 MobiDBLite consensus disorder prediction 28 48 - -
Glsi02g0367 646 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 58 268 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0367 Glsi-ChrGlsi02 2345436 2347376 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0367 59 287 Calmodulin-binding Proteins AT2G36910 25.210 3.68e-15 77.8