Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0365 ATGGCAGGTGAAAGCGTGAACCTTCCACCTGGTTTTCGCTTCTCTCCAACAGATGAAGAGCTCGTCCTTCACTTTCTCTATCGCAAGGCTTCTCTTCTACCATGCCATCCCAATATTATCCCTGATCTTGATCTCTCCCTCTTTCATCCTTCCCAGCTCAATGGGAAAGCTTTGTCAAGTGGAAACCAATTCTATTTCTTCACCAAAGTGAAGGAAAACAGAGTAACAGAAAGTGGGTATTGGAAGGAAATAGGTTTCACTGAGTCAATAGTCTCAGCCGCCGTCAACAAAGTTGGAATGAAGAAATACTTCATATTCAACAATGGAGAAGCAGCTGAAGGTACTGAAACCAATTGGGTAATGCAGGAGTATCATCTTTGGTCATCTCAAGTAAGACGAGAACCGTTGAATTGTGCAAGAAAGGATCAAAAGCAGAGTAAATGGGTTTTATGCAGAGTCTATGAAAGGAACGGAGATGATCAACAAGGTGAAATCTGGGACGATGATGATGATGGAACAGAGCTTTCATGGGCAGACGAAGTGTTTATGTCATTGGATGATGATATCGAAGAAATTAGCTTCCCTAATTTAGATTTCATCGATGCACAGTGA 612 0.4199 MAGESVNLPPGFRFSPTDEELVLHFLYRKASLLPCHPNIIPDLDLSLFHPSQLNGKALSSGNQFYFFTKVKENRVTESGYWKEIGFTESIVSAAVNKVGMKKYFIFNNGEAAEGTETNWVMQEYHLWSSQVRREPLNCARKDQKQSKWVLCRVYERNGDDQQGEIWDDDDDGTELSWADEVFMSLDDDIEEISFPNLDFIDAQ 203
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0365 203 PANTHER NAC TRANSCRIPTION FACTOR 56 8 163 - -
Glsi02g0365 203 Gene3D NAC domain 17 160 IPR036093 GO:0003677|GO:0006355
Glsi02g0365 203 Pfam No apical meristem (NAM) protein 9 126 IPR003441 GO:0003677|GO:0006355
Glsi02g0365 203 SUPERFAMILY NAC domain 4 155 IPR036093 GO:0003677|GO:0006355
Glsi02g0365 203 ProSiteProfiles NAC domain profile. 8 156 IPR003441 GO:0003677|GO:0006355
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Glsi02g0365 Glsi-ChrGlsi02 2335307 2336095 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0365 7 161 NAC Transcription Factor Family AT1G61110 39.286 1.08e-35 125
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Glsi02g0365 NAM 3.5e-26 No_clan
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g0365 02 2335307 2336095 Glsi02g0365 02 2335307 2336095 ECH