Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0353 ATGCCCGCTTGGTGGGGAAGAAAATCCAGCAAGAACAAGGAGCAGCGCCAACAGCGGGAACCACATGCTGGCGGCCCTCAATTTAATTTTATCAAATCTCCCATTAGGAATGGTGCAAAGAAAGAAAAAGACAAACCCAAGAGCTTCGATGAATTTTCCGCCCTGATCGTCTCACGCGATTCCCCCAGGGCCAGTAAGGATTTTACTTCCGTGGCTCCTGGGGTTGTTGGCTCCTCTTCGGGATTTTCATTTTGTGATTCCGATGGTGGGGAGAAGAGAGGGCATCCCTTGCCTCGACCGTCGGTTTCCTCCTCTCACAGCTTTGAAAAGGATCAAGGGGGTGGCTTGGGATCTGCATCGATCTCTGGTTCGAGCGTGAGCTCTACTGGCTCCTATGATGATCATCCAATCTCTCAATCTAATGGTAGCAGAGGACATGTTGATACGAAGCTCAGTATGAGGTCGAGGTCAAAAAGCCCAGGTCCTGGATCAAGAGGACCCACCAGCCCTACATCACCTCTTCATACAAGGTTGCATGTTTTGAGTCTTGATTCACCTACAGGCAAGCAAGATGATGGAAGGAGTCAATGCCATCCTTTGCCGCTTCCACCAGGTTCTCCGACTAGTCCTTCTGCTCTTTCTAACACACGAGCAACTGGAGTACTGGAATACACCGCCAGTAATCTGTCCAAGTGGAAGAAAGGAAAGCTTCTAGGACGGGGAACATTTGGGCATGTTTACCTGGGATTTAATAGTGAAAGTGGACAAATGTGTGCAATAAAAGAAGTGAGGGTCGTCTCTGATGATCATACATCAAAAGAGTGTCTCAAACAACTTAATCAGGAAATAAATTTGCTTAGTCAGCTTTCACATCCGAACATTGTTCAATACTATGGGAGTGAACTGGGGGAAGAGTCTCTTTCAGTTTATTTGGAATATGTCTCTGGTGGTTCTATCCATAAATTACTTCAGGAATATGGTGCATTTAAGGAGCCTGTTATTCAAAATTATACCAGGCAGATCGTCTCTGGACTTGCCTATCTGCACGGAAGAAATACAGTACACAGGGATATTAAAGGGGCTAACATACTAGTTGATCCTAATGGTGAAATCAAGTTGGCAGACTTTGGAATGGCTAAACATATAAATTCTTCTGCCTCAATGCTTTCTTTCAAAGGAAGTCCATACTGGATGGCACCTGAGGTTGTAATGAACACAAATGGCTATAGTCTTGCTGTGGATATATGGAGCTTGGGATGCACAATTCTTGAAATGGCAACATCAAAGCCTCCATGGAGTCAGTATGAAGGGGTAGCTGCAATATTCAAAATTGGAAACAGCAAAGATATGCCCGAAATTCCGGAGCATCTATCTAATGATGCAAAATGTTTCATAAAGCAATGCTTACAAAGAGATCCATCAGCTCGCCCAACAGCTCAGCAGTTACTTGAGCAACCCTTTATTCGAGATCAATCAGCAACAAGAGCTGCAAATGCCAACATAACAAGGGACGCTTTCCCCTACATACTCGATGGAAGCCGGACGCCGCCTATTTTAGAGCTACATTCTAATAGAACAAGTCAAACTTCGCTCGATGGAGATTATACAACAAAGCCAGCTGTTGCAACGTCACGAGCATTACGGAGCTCAAGGGATAACACGAGAACTATTACATCGTTACCAGTATCTCCCTCTTCAAGTCCATTGCGACAGCACGGACTGGCACACAAGAGCTGTTTCCTTTCTCCTCCTCCTCATCCAACTTACTCTATGATGGGACACAATAACTACACTTTGAATGATTTCTCATCATATCCAATGAGATCAAATGCCACATTCACCCTTGATCCTCGGCATGAAACATCTCTATACAAAGCCCACACGCCTGGCGGTTCTCCAAGATCTCGACTCATTTAA 1917 0.4502 MPAWWGRKSSKNKEQRQQREPHAGGPQFNFIKSPIRNGAKKEKDKPKSFDEFSALIVSRDSPRASKDFTSVAPGVVGSSSGFSFCDSDGGEKRGHPLPRPSVSSSHSFEKDQGGGLGSASISGSSVSSTGSYDDHPISQSNGSRGHVDTKLSMRSRSKSPGPGSRGPTSPTSPLHTRLHVLSLDSPTGKQDDGRSQCHPLPLPPGSPTSPSALSNTRATGVLEYTASNLSKWKKGKLLGRGTFGHVYLGFNSESGQMCAIKEVRVVSDDHTSKECLKQLNQEINLLSQLSHPNIVQYYGSELGEESLSVYLEYVSGGSIHKLLQEYGAFKEPVIQNYTRQIVSGLAYLHGRNTVHRDIKGANILVDPNGEIKLADFGMAKHINSSASMLSFKGSPYWMAPEVVMNTNGYSLAVDIWSLGCTILEMATSKPPWSQYEGVAAIFKIGNSKDMPEIPEHLSNDAKCFIKQCLQRDPSARPTAQQLLEQPFIRDQSATRAANANITRDAFPYILDGSRTPPILELHSNRTSQTSLDGDYTTKPAVATSRALRSSRDNTRTITSLPVSPSSSPLRQHGLAHKSCFLSPPPHPTYSMMGHNNYTLNDFSSYPMRSNATFTLDPRHETSLYKAHTPGGSPRSRLI 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0353 638 CDD STKc_MEKK1_plant 231 488 - -
Glsi02g0353 638 Gene3D Transferase(Phosphotransferase) domain 1 229 507 - -
Glsi02g0353 638 ProSiteProfiles Protein kinase domain profile. 232 488 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g0353 638 MobiDBLite consensus disorder prediction 1 214 - -
Glsi02g0353 638 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 65 497 - -
Glsi02g0353 638 FunFam Mitogen-activated protein kinase kinase kinase 230 512 - -
Glsi02g0353 638 MobiDBLite consensus disorder prediction 100 178 - -
Glsi02g0353 638 ProSitePatterns Protein kinases ATP-binding region signature. 238 261 IPR017441 GO:0005524
Glsi02g0353 638 Pfam Protein kinase domain 233 488 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g0353 638 SUPERFAMILY Protein kinase-like (PK-like) 229 569 IPR011009 -
Glsi02g0353 638 SMART serkin_6 232 488 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g0353 638 MobiDBLite consensus disorder prediction 36 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0353 Glsi-ChrGlsi02 2285230 2290355 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0353 1 551 MAP Kinase Kinase Kinase AT1G53570 58.938 0.0 573
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Glsi02g0353 Pkinase 3e-75 CL0016