Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0327 ATGAGTTTGGCGGGGGAAGAAAGCTCAGAGGAGGGTTCAGGGCATGCAGAACCTCCCGATCCTGATGTTCTTGAAACTGATCAATCTTGTCGCTACATTAGGTATAAAGATGTGCTCGGAAAAGGTGCTTTCAAGACAGTTTATAAGGCATTTGATGAGGTCACTGGAATTGAAGTAGCGTGGGGCCAGGTTCAGATTGATGAGGTGCTACAGTCACCAGGTGACTTAGAAAGGCTCCACTCAGAAGTGCATCTCTTGAAAGCATTGAATCACGATAACATCGTAAGATTCTACAATTCCTGGATTGATAATAAGCGCAAGACTGTTAACATAATTACTGAGTTGTTCACCTCGGGTAGCCTCAGACAGTACCGCAAGAAACACAAGAAGGTTGACATGAAGGCTGTTAAAGGATGGGCAAGACAGATTTTAATGGGTTTAAACTACCTCCATAGTCATAACCCGCCAATTATACATCGTGATCTAAAGTGTGATAATATATTTATCAATGGTAACCAAGGTGAAGTTAAAATTGGAGATCTGGGGCTGGCAACTTTCTTGGAGCGGACTAATGCTGAGAGTGTAATTGGAACCCCTGAGTTTATGGCTCCTGAGCTGTATGATGAAAACTACAATGAATTGGCTGACATATATTCTTTTGGAATGTGTATGCTTGAGATGGTGACTTCTGAGTATCCTTACAGTGAATGTAGGAACTCAGCTCAGATATACAAGAAAGTTTCATCTGGTATAAAGCCTGCGTCTCTTTCTAAAGTTAAAGATCCAGAAGTAAAATTATTTATTGAGAAATGTCTAGTCCCAGCACCTCAAAGATTATCAGCAAAGGAGCTTCTGACGGACCCTTTTCTCCAATTGAATGGTTTGGCAAAAAGTCATCGTCTCTCTTTACCAGATATTGTTCTTCCCAAATTTGGAGCATTTGGAGATCGTTGTCTGATGTCGGAAGGTCCTACTAGTGCACGTAATGGATCCAATTATTTGGATCTTGGTGACACTGGCGAGATACCTGTGATCACCATATTTAATAATTCTACTGATGGAGCATCGCGTCCTCCATGTGTTGAGATACGAAGGTTGAAGAGAGGTGATATTTTCTTTCTAAAAGGTGAAGAAAATGATGACAACTCTGTATCAATAGTTCTTCGGATAGCTGATCGGGGAGGGCGGGCAAGAAATATCCATTTTTTATTCTACCTTGATAGTGATACTGCCGTCTCGGTTTCAAGTGAAATGGTTGAGCAACTTGAACTTGATGATCAGAATGTAAAATTCATTGCGGAGTTGATAGATCTGTTATTGATGAATTTGGTTCCCGGCTGGAAACCTTGTATAAACATAGATCATTTGGTTTCTCCAAATTGTCGAAAAATTTATGCCCGACAGAAGGACTCTGAGTTGGCAAAACAGAATAAAATCTCAGAAGAATCTAGCAAAAATGTTGCTGGAGATGTAGGTCCCCCAACCTCGCTTGGAAGGTCAACTGCAAAAGAAAACCATGATCATGTGAACTTTGAGGAGGTTTTATCTCATGCCAGCATTGATCTTCAAAATGCAACCAAGACAGATGATACGTGTTCCGAGATTTCATATGTCTCTGCAACATCTGACTTTAACGATTGGAAGTTATGTTCAATTTCATTCTTGTCTGCAGAGTCAGGATTCACCGACTTAAACTTACCTAGAGTGATTGGAGGGAGTGAATTGTCATTTGTATCGGCATCGCCTGATGATGAAAGCAAGGTTTCAGACTTGGGAAGCCGTGGTATGGTGAGCTTCTCTACCCATCCAATTGATGTTTCCACTCTGTCTGATCCGGAGGATGAGTTGAGAATAGAATTAGATATGATTGAACAGCAGTACCAGGAGGCAATCAAAGAAATATCTAAAAGAAGAAACCAGGCAATAATGGAGACTAGAAGGAGGCTGTCACAGAAGAAGATGCAATCATAG 1971 0.4099 MSLAGEESSEEGSGHAEPPDPDVLETDQSCRYIRYKDVLGKGAFKTVYKAFDEVTGIEVAWGQVQIDEVLQSPGDLERLHSEVHLLKALNHDNIVRFYNSWIDNKRKTVNIITELFTSGSLRQYRKKHKKVDMKAVKGWARQILMGLNYLHSHNPPIIHRDLKCDNIFINGNQGEVKIGDLGLATFLERTNAESVIGTPEFMAPELYDENYNELADIYSFGMCMLEMVTSEYPYSECRNSAQIYKKVSSGIKPASLSKVKDPEVKLFIEKCLVPAPQRLSAKELLTDPFLQLNGLAKSHRLSLPDIVLPKFGAFGDRCLMSEGPTSARNGSNYLDLGDTGEIPVITIFNNSTDGASRPPCVEIRRLKRGDIFFLKGEENDDNSVSIVLRIADRGGRARNIHFLFYLDSDTAVSVSSEMVEQLELDDQNVKFIAELIDLLLMNLVPGWKPCINIDHLVSPNCRKIYARQKDSELAKQNKISEESSKNVAGDVGPPTSLGRSTAKENHDHVNFEEVLSHASIDLQNATKTDDTCSEISYVSATSDFNDWKLCSISFLSAESGFTDLNLPRVIGGSELSFVSASPDDESKVSDLGSRGMVSFSTHPIDVSTLSDPEDELRIELDMIEQQYQEAIKEISKRRNQAIMETRRRLSQKKMQS 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0327 656 FunFam Probable serine/threonine-protein kinase WNK1 18 114 - -
Glsi02g0327 656 SMART serkin_6 33 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g0327 656 Pfam Protein kinase domain 36 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g0327 656 ProSiteProfiles Protein kinase domain profile. 33 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g0327 656 MobiDBLite consensus disorder prediction 10 25 - -
Glsi02g0327 656 SUPERFAMILY Protein kinase-like (PK-like) 35 331 IPR011009 -
Glsi02g0327 656 Gene3D Transferase(Phosphotransferase) domain 1 116 295 - -
Glsi02g0327 656 MobiDBLite consensus disorder prediction 475 503 - -
Glsi02g0327 656 Gene3D Phosphorylase Kinase; domain 1 18 114 - -
Glsi02g0327 656 Coils Coil 613 644 - -
Glsi02g0327 656 FunFam probable serine/threonine-protein kinase WNK9 116 295 - -
Glsi02g0327 656 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
Glsi02g0327 656 CDD STKc_WNK 31 290 - -
Glsi02g0327 656 Gene3D - 382 445 - -
Glsi02g0327 656 MobiDBLite consensus disorder prediction 1 25 - -
Glsi02g0327 656 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 19 650 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0327 Glsi-ChrGlsi02 2092187 2095700 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0327 133 459 MAP Kinase Kinase Kinase AT1G49160 71.560 2.52e-172 496
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Glsi02g0327 Pkinase 1.9e-53 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g0327 02 2092187 2095700 Glsi02g0327 02 2092187 2095700 ECH