Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0324 ATGCGTGTGAAGTGGTTTCCTATATATAATCCCCCGAAGCGACCAACCCACAAGAAGCTCCAACTTAATTCATCAACAACTCCAACAAACATGTATGCTTCTACTTCCTCTGTCTTGCAGGATGTTTTTGGGGAGTTTCATTCCAGAAGGTTGCTCCTTCACTCCCCACTTAACTCGGCCAACCCCCCGTCATCCTTAAACGCCCACAACAATTCCACGGATTCATATCTGGGAGATGGTAATTTCGATGCAAATGTTGTTATGGTACTCTCAGTCCTCTTGTGTGCTCTTATCTGCTCGCTGGGGTTGAATTCCATCATAAAGTGTGCCTTAAGGTGTTCGAATTTAGTCGTCAATGAATCTGGGACCAACCCTCCACCTCGAGTGGCCAACACAGGAGTAAAGAAGAAAGCTTTGAAGACTTTCCCCACAGTAGGCTACTCTGCCGAGTTGAAACTGCCAGGTTTGGATACTGAGTGTGTCATATGCCTCTCCGAGTTCAACAATGGTGATCGTGTGCGCATTTTGCCCAAGTGCAACCATGGTTTCCATGTTCGCTGCATTGACAAATGGCTAAGTTCACATTCCTCTTGCCCTAAATGCAGACAGTGCCTCATTGAGACTTGCCAAAAGATTGTTGGCTGCAGGCAGGCTAGCTCGCCCCAACCACCTGTACCACCAGTGCCAGAAACCATTGTGATGATTACACCCTTAGAACCGGAGGGTTTGGTACGTAACTACAGGGAACTCTGCTAA 756 0.4735 MRVKWFPIYNPPKRPTHKKLQLNSSTTPTNMYASTSSVLQDVFGEFHSRRLLLHSPLNSANPPSSLNAHNNSTDSYLGDGNFDANVVMVLSVLLCALICSLGLNSIIKCALRCSNLVVNESGTNPPPRVANTGVKKKALKTFPTVGYSAELKLPGLDTECVICLSEFNNGDRVRILPKCNHGFHVRCIDKWLSSHSSCPKCRQCLIETCQKIVGCRQASSPQPPVPPVPETIVMITPLEPEGLVRNYRELC 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0324 251 SMART ring_2 160 201 IPR001841 -
Glsi02g0324 251 CDD RING-H2_EL5-like 159 202 - -
Glsi02g0324 251 ProSiteProfiles Zinc finger RING-type profile. 160 202 IPR001841 -
Glsi02g0324 251 FunFam RING-H2 finger protein ATL73 122 207 - -
Glsi02g0324 251 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 124 206 IPR013083 -
Glsi02g0324 251 SUPERFAMILY RING/U-box 140 208 - -
Glsi02g0324 251 PANTHER RING-H2 FINGER PROTEIN ATL78 41 243 IPR044602 GO:0016567|GO:0016740
Glsi02g0324 251 Pfam Ring finger domain 159 202 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0324 Glsi-ChrGlsi02 2072811 2073761 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0324 50 206 C3H Transcription Factor Family AT3G10910 47.273 4.15e-40 135