Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0316 ATGCTGGAAATTTCGAGTTTACCGGAAAATTCTACCGAAAGCCGCCACACACATCCGGAGGGTGACAGTGGACATGTCTCTGATGGCTTCAAAGACGAACAGAAAGTCGCAGGCGAGGACGTTGACAGGAATATCACCTCTAACCGGTGGCCTCCCGAAGAGACTAGGGCTTTGCTTAACATAAGGTCTGACCTGGACCTTGCTTTCAGGGATACAACCCCCAAAGCTAGTCTTTGGGAACAAGTTTCAAGGAGATTAGAAGAGCGGGGATATAAGAGAAGTGCGAAGAAATGCAAGGAGAAGTTTGAAAACATTTACAAGTACCATAGAAGGACCAAGGAAGGTCGTTCTGGGCGTCCTAACGGTAAGACTTACCGATTTTTTGAGCAATTAGAAGCTCTACATAGTCACCCAGTTCTCCTTCCACCTTCCCCAGAAAAGAATCAGGGACAAGTAGAGAGCGCAGCAAAAACCACAAACGCAATGGATCTATCAGATGTTATTGAAGATGCGATGCCATGTTCGATTCGATTCCCTAGTGCAAATTGGAATGAACCGTCTAGTACAACCACTTCATCTTCGAGCAAAGAACCGGGGGAAAATGTTCGAAAGAAGAGGAAACTGACAGATTTTTTTGAAAGGTTGATGAAGGGAGTAATAGAGAAGCAAGAGATCCTACAGAAGAACTTTATGGAGATGTTAGAAAAATGCGAACAAGATCGAATAGCGAGAGAGGAAGCTTGGAAGATGCAAGAATTAGCTCGGATTAAGAGGGAGCGTGAGCTTTTGGCTCAAGAAAGATCAATTGCAGCAGCAAAGGATGCTGCGGTGCTTACCCTTCTCCAAAAGTTCAAAGAACAAGCTGGGCCAGTGCAATTGCCTGAGTCAATTTTGGGTGAGAACCCAATTCCCGATGATAAAGATAAGGACAAGCAAGAAAATACTGATAATGCAGGCAGTGTTAATGATAACCAAGAATGTACAAATAGGAAGAGTTTCACGCAGACCAGTGTCTCGCGATGGCCCAAAGATGAAGTGGAAGCTTTGATTAGATTGAGGACGAAGACAAACCTTGGTGTGCAGTATGAAGGAGACGGGACTAAAGGACCTCTATGGCAGGAGATATCTTGCGCAATGAAAAAGCTTGGCTACGATCGCAGTGCCAAGAGATGCAAAGAGAAATGGGAGAATATAAATAAATACTTTAAGAGGATGAAAGGAAAAAATAGGAAGAAGCCTGAGGATTCTAAGACGTGCCCTTATTTTCACCAGCTCGATGCTTTATACCGTGAGAAGCCTAAAGAGATGGACGAATCAGCCAGTAGTGGTAAGGAGTTGAAGCCCGAGGAGCTCCTAATGCATATTATGGGTGGTGAACAAGAGCAGCAACAGCTCGAGTCATCATCTGAGGATGCTGACAGAGATCAGAACAGGGATCAGAATGGAGGAGGATAA 1455 0.4467 MLEISSLPENSTESRHTHPEGDSGHVSDGFKDEQKVAGEDVDRNITSNRWPPEETRALLNIRSDLDLAFRDTTPKASLWEQVSRRLEERGYKRSAKKCKEKFENIYKYHRRTKEGRSGRPNGKTYRFFEQLEALHSHPVLLPPSPEKNQGQVESAAKTTNAMDLSDVIEDAMPCSIRFPSANWNEPSSTTTSSSSKEPGENVRKKRKLTDFFERLMKGVIEKQEILQKNFMEMLEKCEQDRIAREEAWKMQELARIKRERELLAQERSIAAAKDAAVLTLLQKFKEQAGPVQLPESILGENPIPDDKDKDKQENTDNAGSVNDNQECTNRKSFTQTSVSRWPKDEVEALIRLRTKTNLGVQYEGDGTKGPLWQEISCAMKKLGYDRSAKRCKEKWENINKYFKRMKGKNRKKPEDSKTCPYFHQLDALYREKPKEMDESASSGKELKPEELLMHIMGGEQEQQQLESSSEDADRDQNRDQNGGG 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0316 484 MobiDBLite consensus disorder prediction 13 49 - -
Glsi02g0316 484 Gene3D - 50 111 - -
Glsi02g0316 484 Gene3D - 341 404 - -
Glsi02g0316 484 CDD GT1 48 113 - -
Glsi02g0316 484 MobiDBLite consensus disorder prediction 292 339 - -
Glsi02g0316 484 MobiDBLite consensus disorder prediction 301 316 - -
Glsi02g0316 484 ProSiteProfiles Myb-like domain profile. 42 106 IPR001005 -
Glsi02g0316 484 MobiDBLite consensus disorder prediction 178 204 - -
Glsi02g0316 484 MobiDBLite consensus disorder prediction 317 339 - -
Glsi02g0316 484 Pfam Myb/SANT-like DNA-binding domain 48 134 IPR044822 -
Glsi02g0316 484 Pfam Myb/SANT-like DNA-binding domain 340 428 IPR044822 -
Glsi02g0316 484 CDD GT1 339 406 - -
Glsi02g0316 484 MobiDBLite consensus disorder prediction 1 53 - -
Glsi02g0316 484 FunFam Trihelix transcription factor GT-2 341 404 - -
Glsi02g0316 484 MobiDBLite consensus disorder prediction 430 454 - -
Glsi02g0316 484 MobiDBLite consensus disorder prediction 430 484 - -
Glsi02g0316 484 MobiDBLite consensus disorder prediction 180 197 - -
Glsi02g0316 484 ProSiteProfiles Myb-like domain profile. 339 399 IPR001005 -
Glsi02g0316 484 SMART sant 337 401 IPR001005 -
Glsi02g0316 484 SMART sant 46 108 IPR001005 -
Glsi02g0316 484 FunFam Trihelix transcription factor GT-2 50 111 - -
Glsi02g0316 484 PANTHER FI21293P1 15 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0316 Glsi-ChrGlsi02 2043225 2044995 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0316 36 434 Trihelix Transcription Factor Family AT1G76880 45.275 2.46e-115 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Glsi02g0316 Myb_DNA-bind_4 4.2e-20 CL0123