Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0290 ATGAAACCTCTATATCTCACCAGCTACCACTGTTGCTCTTTCTTCATCTTCTTCTCCCTCACCTATCTCTCTCTCCGACCAGCACCTTCATCCTGTGCTCCGTCAGTTTCCAGAGACTCCACTCAGCAGTTGATCGACTTCAAGGCTTCTCTGCCAAACCCATCTCTACTTCAGAACTGGCTCCCAAATCAAAACCCATGTTCCTTCACTGGGATTTCCTGCAAGGAAACCCAGGTTTCTTCCATAGACCTCAGCTTCGTCCCCCTGAGCACCAATTTCAGCCTTGTCTCTGCCTATCTCCTCACCCTCGACCAATTGGAAGTTCTTACCCTGAAATCCACCAATCTTTCCGGTACCATTAGTGTACTCTTCCCTAGGTCCAAGTGTAGCACCTCATTGAGCAGCATAGATCTATCTCAGAACGCTTTGTCTGGCTCGCTTTCAGACTTACCCTATCTAGCCTCCTGTTCAAGTTTGAAATCCCTCAACCTTTCTAATAATATTCTTGAATTTTCGGGGAAAGATTCCGCCGGGTTGAGGCTCAATCTTCAAGTCCTTGACATCTCTTTCAATAACATTTCGGGTCCAAACGTTGTCCCTTGGATCTTATCACCGGGTTGCGACAACATCCGTCACTTGGCTCTCAGAGGAAACAAAATCACCGGAGGAATTAACCTGTCGAAGTGCAAGAAATTGCAGCATTTTGACATTTCCTCTAACAATTTCTCTGTAGGTATTCCTTCATTCGGGGAATGTTCGACTTTAGAGTACCTTGACATCTCTGCCAATAAGTATTCCGGTGACATTGGCCTCGCCCTCTCTTCCTGCAAGCAGCTCAGCTTCTTGAACATTTCGGGCAACGAGTTCTCGGGTCCGATTCCCTCACTTCCTGCTGGCTCTCTGCAGTTCCTTTATCTTGCTAGCAACCATTTTCAAGGACAGATTCCGGCACCACTCGCCGACTTGTGTTCCACTCTAGTCGAGCTCGATCTTTCCTCAAACTACCTCTCCGGCTTGGTGCCGAGCGGTTTGAGCGCTTGTTCTTCGCTGGAATCCCTTGATATATCTGAGAACAAGTTATCTGGCGAATTACCAATTGAAATTTTCATGGACATGAGCAGCTTGAAAAAGCTCGTTCTTTCGTTCAATGATTTCGTTGGTAATTTACCTGGGACTTTGTCGAAGCTGGTGAACTTGGAATCGTTGGATCTGAGTTCTAATAACTTCACTGGGTCTATACCTAGAGGGCTATGTGAAGATCCTAGGAATAATTTCAAAGAATTATACCTACAGAATAATCTGTTCACGGGTTCTATTCCACCCACACTCAGCAACTGTTCTCAGCTGGTTTCCTTGGATTTAAGTTTCAACTACCTGACGGGGACTATCCCTTCCAGCTTGGGGTCTCTTTCGAAGCTCCGTGATTTGATTATTTGGCTAAATCAGCTCCATGGCGAAATACCCCAAGAGCTCATGTACATCAAAACCCTTGAGAATTTGATTTTAGATTTTAATGAGTTGACAGGAACAATTCCTTCTGGCCTAAGCAACTGCACCAACATGAATTGGATCTCCTTGTCTAATAACAAGTTGAGCGGGGTGATTCCGGCTTGGATTGGTCAACTTTCGAACCTTGCAATCCTGAAACTGAGTAATAACTCCTTCTCTGGGAGGATTCCGCCGGAGCTTGGGGATTGTCATAGCTTGATATGGTTAGATCTAAATACAAATTTTCTGAACGGGTCAATTCCTCCTGAATTGTTTAAGCAATCTGGGAAAATTGCGGTGAATTTTATTAGTGGGAAAACTTATGTGTATATCAAGAATGATGGCAGTAAGGAGTGTCATGGAGCAGGGAATTTATTAGAGTTTGCGGGGATCAGTCAGGAACAGTTGAACAGAATTTCAACTAGGAACCCCTGCAACTTCACTAGAGTTTATGGAGGTAAGCTCCAACCTACATTTAACCATAATGGTTCTATGATTTTTCTGGATATTTCACACAACATGTTGTCGGGTAGTATTCCCAAGGAGATTCGGAGCATGTACTATTTATACATTTTGAATTTGGGTCACAATGATATATCTGGAAATATCCCTGGAGAGCTTGGAAGCTTGACAAATATCAACATACTTGATCTCTCCCACAATAAGTTTGAAGGGCAAATTCCACAAACTTTATCAGGCCTTTCCATGCTCAATGATATTGATCTGTCTAACAACTATCTATCAGGACCGATTCCTGAATCTCCTCAATTTGAAACCTTTCCGGCTGTCAGATTTATGAATAATTCTCGTCTCTGCGGATACCCTCTTGATCCATGTGGGGCAGACTCAGGATCAAGTGCAAATGCCCAACATCAGAAGTCTCACAGGAGACAGGCATCTCTTGCAGGGAGTGTGGCCATGGGATTGCTATTCTCCCTCTTCTGCATCTTTGGTTTGATTATAATTGCGATTGAGACCAGAAAGAGGAGGAAGAAAAAGGAATCTACTCTGGATGTCTACATTGACAGTCATTCTCATTCTGGTACAGCCAATGTGAGCTGGAAGCTGACAACTGCCCGTGAAGCACTTAGCATAAACCTTGCGACATTTGAGAAGCCCCTCCGGAAACTTACTTTTGCAGATCTTCTTGATGCTACAAACGGCTTTCACAATGACAGTCTTATTGGTTCTGGTGGTTTCGGTGATGTATACAAGGCACAGTTGAAGGATGGAAGTGTTGTGGCCATCAAGAAACTGATACATATCAGTGGGCAGGGTGACAGGGAATTCACTGCTGAAATGGAGACTATAGGAAAAATCAAGCATCGGAACCTAGTTCCCCTTCTGGGCTACTGCAAGGTTGGAGAAGAAAGACTCTTGGTTTATGAATACATGAAATATGGAAGTCTAGAAGATGTTTTGCATGACCCGAAGAAAGTTGGGATCAAGCTGAACTGGACAGCAAGGAGGAAGATCGCCATTGGGGCTGCCAGGGGATTAGCTTTTCTTCACCACAATTGCATCCCACACATCATTCATAGAGACATGAAGTCAAGTAATGTATTGCTTGATGAACACTTGGAAGCCAGAGTCTCTGATTTTGGAATGGCTAGGCTTATGAGTGCTATGGACACCCATTTAAGTGTCAGCACCCTAGCAGGCACCCCTGGCTATGTTCCTCCCGAATATTATCAGAGCTTTAGATGCTCCACTAAAGGTGATGTTTATAGTTATGGTGTAGTTTTGTTGGAGCTGCTAACAGGGAAACGACCTACGGATTCAGCTGATTTTGGCGATAATAATCTTGTGGGCTGGGTTAAACAACATGCGAAACTGAAAATAAGTGATGTTTTTGATCCTCAGCTCATGAAAGAGGACCCAAGTCTTGAGATTGAGCTTTTGCAGCACTTAAAGGTTGCTTGTGCTTGCTTGGATGATCGACCTTGGAGGCGTCCCACAATGATTCAAGTCATGGCAATGTTCAAAGAAATCCAAGCGGGGTCTGGGATTGATTCCCAATCCACCATAGCCACAGAAGATGGAGGTTTCGGTACTGTTGAAATGGTAGAGATGACCATAAAAGAAGCCCCTGAATTCAGCAAGCAGTAG 3597 0.4423 MKPLYLTSYHCCSFFIFFSLTYLSLRPAPSSCAPSVSRDSTQQLIDFKASLPNPSLLQNWLPNQNPCSFTGISCKETQVSSIDLSFVPLSTNFSLVSAYLLTLDQLEVLTLKSTNLSGTISVLFPRSKCSTSLSSIDLSQNALSGSLSDLPYLASCSSLKSLNLSNNILEFSGKDSAGLRLNLQVLDISFNNISGPNVVPWILSPGCDNIRHLALRGNKITGGINLSKCKKLQHFDISSNNFSVGIPSFGECSTLEYLDISANKYSGDIGLALSSCKQLSFLNISGNEFSGPIPSLPAGSLQFLYLASNHFQGQIPAPLADLCSTLVELDLSSNYLSGLVPSGLSACSSLESLDISENKLSGELPIEIFMDMSSLKKLVLSFNDFVGNLPGTLSKLVNLESLDLSSNNFTGSIPRGLCEDPRNNFKELYLQNNLFTGSIPPTLSNCSQLVSLDLSFNYLTGTIPSSLGSLSKLRDLIIWLNQLHGEIPQELMYIKTLENLILDFNELTGTIPSGLSNCTNMNWISLSNNKLSGVIPAWIGQLSNLAILKLSNNSFSGRIPPELGDCHSLIWLDLNTNFLNGSIPPELFKQSGKIAVNFISGKTYVYIKNDGSKECHGAGNLLEFAGISQEQLNRISTRNPCNFTRVYGGKLQPTFNHNGSMIFLDISHNMLSGSIPKEIRSMYYLYILNLGHNDISGNIPGELGSLTNINILDLSHNKFEGQIPQTLSGLSMLNDIDLSNNYLSGPIPESPQFETFPAVRFMNNSRLCGYPLDPCGADSGSSANAQHQKSHRRQASLAGSVAMGLLFSLFCIFGLIIIAIETRKRRKKKESTLDVYIDSHSHSGTANVSWKLTTAREALSINLATFEKPLRKLTFADLLDATNGFHNDSLIGSGGFGDVYKAQLKDGSVVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDPKKVGIKLNWTARRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLLDEHLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPQLMKEDPSLEIELLQHLKVACACLDDRPWRRPTMIQVMAMFKEIQAGSGIDSQSTIATEDGGFGTVEMVEMTIKEAPEFSKQ 1198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0290 1198 FunFam serine/threonine-protein kinase BRI1-like 2 846 960 - -
Glsi02g0290 1198 SUPERFAMILY RNI-like 300 586 - -
Glsi02g0290 1198 Gene3D Transferase(Phosphotransferase) domain 1 961 1162 - -
Glsi02g0290 1198 ProSiteProfiles Protein kinase domain profile. 885 1160 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g0290 1198 Pfam Leucine Rich Repeat 398 418 IPR001611 GO:0005515
Glsi02g0290 1198 SUPERFAMILY Protein kinase-like (PK-like) 871 1161 IPR011009 -
Glsi02g0290 1198 ProSitePatterns Protein kinases ATP-binding region signature. 891 914 IPR017441 GO:0005524
Glsi02g0290 1198 Pfam Brassinosteroid receptor island domain 592 656 IPR045381 -
Glsi02g0290 1198 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 323 1159 - -
Glsi02g0290 1198 PRINTS Leucine-rich repeat signature 326 339 - -
Glsi02g0290 1198 PRINTS Leucine-rich repeat signature 706 719 - -
Glsi02g0290 1198 FunFam Brassinosteroid LRR receptor kinase 961 1162 - -
Glsi02g0290 1198 FunFam Brassinosteroid LRR receptor kinase 131 608 - -
Glsi02g0290 1198 Pfam Protein kinase domain 885 1155 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g0290 1198 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1007 1019 IPR008271 GO:0004672|GO:0006468
Glsi02g0290 1198 Pfam Leucine rich repeat N-terminal domain 40 74 IPR013210 -
Glsi02g0290 1198 SUPERFAMILY L domain-like 56 365 - -
Glsi02g0290 1198 Gene3D - 597 657 - -
Glsi02g0290 1198 FunFam Serine/threonine-protein kinase BRI1-like 1 599 656 - -
Glsi02g0290 1198 Pfam Leucine rich repeat 496 554 IPR001611 GO:0005515
Glsi02g0290 1198 Pfam Leucine rich repeat 300 360 IPR001611 GO:0005515
Glsi02g0290 1198 CDD STKc_IRAK 891 1160 - -
Glsi02g0290 1198 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 653 775 - -
Glsi02g0290 1198 Gene3D Ribonuclease Inhibitor 44 775 IPR032675 -
Glsi02g0290 1198 SMART LRR_typ_2 372 395 IPR003591 -
Glsi02g0290 1198 SMART LRR_typ_2 542 566 IPR003591 -
Glsi02g0290 1198 SMART LRR_typ_2 396 420 IPR003591 -
Glsi02g0290 1198 SMART LRR_typ_2 347 371 IPR003591 -
Glsi02g0290 1198 SMART LRR_typ_2 706 730 IPR003591 -
Glsi02g0290 1198 SMART serkin_6 885 1157 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g0290 1198 SUPERFAMILY L domain-like 653 776 - -
Glsi02g0290 1198 Gene3D Phosphorylase Kinase; domain 1 845 960 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0290 Glsi-ChrGlsi02 1872515 1876111 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0290 42 1194 Receptor kinase-like Gene Family AT4G39400 71.343 0.0 1616
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Glsi02g0290 Pkinase 1.7e-45 CL0016