LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi02g0288	ATGTCAACAACGTCCCAAGCTATTGTGAACCAGAGCTTGTTTGAGGAGCAGGATCAGATGGAGTTTCTTCCTTTCCCAGTACACCTGACCTTCCCTTCTTTGGGTTGCCATCAATCTTTGAAATCCTTCAGTGCCATAGCTCCTTCATCACTCGCATCCGAAGCAGCTTCTACTCCTACTACTACAGTAAATCTAACGGAAACCCTACTCGCCTCCACAGCCCATAAGCCAAGGGAAGATATCACTGCTAGTTTGGGAGGAGCCCAACTCCTTTCCTTGCATAGATCGAGTATAAATCCATGGGCATGGGGAGAAATAAACGATTGTTTGAGCAGCAAGGGAAGTGAAGGAGATCGAGAGCATCATCTAGGGGTTTCTGCCACGAAGATGAAGAAAATCAAGGGAAGAAGGAAGGTGAGGGAGCCTAGGTTTTGCTTCAAGACCATGAGCGATGTGGATGTGTTGGATGATGGCTACAAGTGGAGGAAGTACGGGCAGAAGGTGGTGAAGAACACGCAGCACCCCAGAAGCTACTACCGCTGCACACAAGATAACTGTCGAGTAAAGAAACGCGTGGAGCGCTTAGCCGAGGATCCAAGGATGGTGATAACCACATATGAAGGGAGGCATGTTCACTCCCCCTCAAATGATCTCGAAGAATCTCAAACTCCATCTCAGCTTAGTAATTTCTTGTGGTAG	699	0.4793	MSTTSQAIVNQSLFEEQDQMEFLPFPVHLTFPSLGCHQSLKSFSAIAPSSLASEAASTPTTTVNLTETLLASTAHKPREDITASLGGAQLLSLHRSSINPWAWGEINDCLSSKGSEGDREHHLGVSATKMKKIKGRRKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHVHSPSNDLEESQTPSQLSNFLW	232

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi02g0288	232	MobiDBLite	consensus disorder prediction	209	232	-	-
	Glsi02g0288	232	Pfam	WRKY DNA -binding domain	156	212	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Glsi02g0288	232	FunFam	WRKY transcription factor 57	141	215	-	-
	Glsi02g0288	232	PANTHER	WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED	92	216	IPR044810	GO:0003700
	Glsi02g0288	232	SUPERFAMILY	WRKY DNA-binding domain	147	214	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Glsi02g0288	232	MobiDBLite	consensus disorder prediction	217	232	-	-
	Glsi02g0288	232	Gene3D	WRKY domain	142	208	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Glsi02g0288	232	SMART	WRKY_cls	155	214	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Glsi02g0288	232	ProSiteProfiles	WRKY domain profile.	150	215	IPR003657	GO:0003700\|GO:0006355\|GO:0043565

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi02g0288	Glsi-ChrGlsi02	1862034	1863261	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Glsi02g0288	37	232	WRKY Transcription Factor Family	AT4G39410	50.000	8.85e-68	209

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Glsi02g0288		WRKY	9.9e-25	CL0274