Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0280 ATGCCAGCGGTGCAACATCTAAGAACTTTTATAACATGCAAAAAATGTAAAGATAGGGTTAACCAAAACAAGTTAGAAGTGAGCCAAAGGGTCGCGTTCAGAACCAGATCCGAGGTTGAGATTATGGATGATGGATACAAATGGAGGAAGTATGGAAAGAAGTCAGTGAAGAGTAGTCCGAATCCAAGGAACTACTACAAGTGTTCAAGTGGAGGATGCAAAGTGAAGAAAAGGGTGGAAAGGGACAAAGACGATTCAAGCTATGTGATAACAAGTTATGATGGGATGCACAACCATGAGAGCCCATGTGCAGCCTACTACAGCCACAAGTCTTCCTTGGCTTTGCCGCAGCCTTCTGCAAACTTATCGTCTTCCTAG 378 0.4365 MPAVQHLRTFITCKKCKDRVNQNKLEVSQRVAFRTRSEVEIMDDGYKWRKYGKKSVKSSPNPRNYYKCSSGGCKVKKRVERDKDDSSYVITSYDGMHNHESPCAAYYSHKSSLALPQPSANLSSS 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0280 125 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 22 108 IPR044810 GO:0003700
Glsi02g0280 125 SMART WRKY_cls 42 101 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi02g0280 125 Gene3D WRKY domain 26 103 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi02g0280 125 ProSiteProfiles WRKY domain profile. 37 102 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi02g0280 125 SUPERFAMILY WRKY DNA-binding domain 34 102 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi02g0280 125 FunFam WRKY transcription factor 57 28 102 - -
Glsi02g0280 125 Pfam WRKY DNA -binding domain 43 100 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0280 Glsi-ChrGlsi02 1776039 1776818 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0280 26 108 WRKY Transcription Factor Family AT5G64810 69.880 8.33e-41 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Glsi02g0280 WRKY 1.3e-22 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g0280 02 1776039 1776818 Glsi02g0280 02 1776039 1776818 ECH