Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0268 ATGGAGGTAGGTTTGTGTGCAAAGGCCACGAACTGGTGGGTATTCACACTCCCAGCTTTTCTTGGCTCCCAAAACCTTATTGGGGATGCCTATGCCTTGCTTTCCATCTTTATTGTCTTTGTGACTCTTGGCCTTCTTTCATGGGCTTTTGCTGTTGGTGGTGTTGCATGGAAAAATGGTAGAAACGCAAGGGGACGAGTTCCCATCCCCGGACCAAGGGGTCTTCCTATCTTTGGCAGCTTGTTCACCTTAAGCCGTGGTTTGGCTCACCGTTCCCTTGCTATCATGGCTTGGACCCGTGCTAATACTCAGCTCATGGCTTTCAGCCTCGGCTTGGCTACTCCCGTTGTTGTAGCTTCCGATCCCACCACTGCCAAAGAAATCCTCACCTCACCTCACTTCGCCGACCGACCACTTAAGCAGTCGGCTAAGAGCCTGATGTTTAGCCGAGCTATTGGCTTTGCTCCCAATGGCACTTACTGGCGTCTCCTGAGGAAGATAGCTTCGTCCCACCTGTTTGCACCCCGGCGCATTATAGCCCACGAAGCCGGACGCCAACTAGAATGCGACGCCATGTTGCACAACATAGAAAACGAACAAAAACTCCGCGGAAGAGTATCTCTACGAAAGTACCTGCAAGCCGCCTCCTTAAACAACATCATGAGTAGCGTCTTCGGAAAGAGGTACGAGCCATCCCTGGAAAGTGAAGAACTTCGAGAGCTCAAGGAAATGGTTAGGGAAGGCTTTGAGCTCTTGGGTGCTTTCAACTGGTCCGATTATCTTCCATGGCTGAGTAACCTCTATGATCCGCATCGTATAAATGAACGATGCTCCAAACTTGTCCCCCGTGTCAGGAAATTTGTTCGAGGAATCATAGAGGAACACCGAGCCGTTAAGTTCAAAAAGATGTCTGATAACGATGATTTTGTTGATGTTCTGCTATCTTTGGATGGAGATGACAAGCTCGAGGAAAATGATATGGTTGCTGTGTTGTGGGAAATGATTTTCAGAGGGACAGACACAACTGCGTTGTTGACGGAGTGGGCAATGGCGGAGTTGGTTCTGAACCCTTACGTGCAGGATAAGCTCTACAGAGAAATCGACCAAGTCGTTGGTGATGGAATTGTGAGAGACGCTGACGTGGCGAGAATGCCGTACTTGCAGGCGGTGGTGAAGGAAGCGCTACGGGTACATCCACCTGGCCCACTCCTATCGTGGGCCCGTCTTTCGACGTCGGACGTCAACCTTAGCAACGGAATGGTAGTTCCTGCCAACACGACCGCCATGGTGAACATGTGGGCCATAACGCACGACCCTCGTATATGGGACGCCCCACTCGAGTTCAGGCCCGAAAGGTTCCTGGAGAGGGAAGGGGGTGCTGACGTGGATGTCAGGGGTGGTGATCTGAGGCTCGCACCCTTTGGAGCCGGGCGTAGGGTGTGCCCTGGCAAAAACCTTGGACTGGTTACTGTGGCTCTGTGGGTGGCCAAGTTGGTGCACCAGTTCAAGTGGGTCCAAGATGAGGCTCGACCAGTTGATCTGAGCGAGGTTCTGAAGCTGTCCTGCGAGATGAAGTACTCACTGCATGCTGTGGCGGTGGAAAGAAGGGTTGGCCGATCATTTTAG 1626 0.5203 MEVGLCAKATNWWVFTLPAFLGSQNLIGDAYALLSIFIVFVTLGLLSWAFAVGGVAWKNGRNARGRVPIPGPRGLPIFGSLFTLSRGLAHRSLAIMAWTRANTQLMAFSLGLATPVVVASDPTTAKEILTSPHFADRPLKQSAKSLMFSRAIGFAPNGTYWRLLRKIASSHLFAPRRIIAHEAGRQLECDAMLHNIENEQKLRGRVSLRKYLQAASLNNIMSSVFGKRYEPSLESEELRELKEMVREGFELLGAFNWSDYLPWLSNLYDPHRINERCSKLVPRVRKFVRGIIEEHRAVKFKKMSDNDDFVDVLLSLDGDDKLEENDMVAVLWEMIFRGTDTTALLTEWAMAELVLNPYVQDKLYREIDQVVGDGIVRDADVARMPYLQAVVKEALRVHPPGPLLSWARLSTSDVNLSNGMVVPANTTAMVNMWAITHDPRIWDAPLEFRPERFLEREGGADVDVRGGDLRLAPFGAGRRVCPGKNLGLVTVALWVAKLVHQFKWVQDEARPVDLSEVLKLSCEMKYSLHAVAVERRVGRSF 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0268 541 Gene3D Cytochrome P450 60 538 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g0268 541 PRINTS E-class P450 group I signature 471 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g0268 541 PRINTS E-class P450 group I signature 215 233 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g0268 541 PRINTS E-class P450 group I signature 346 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g0268 541 PRINTS E-class P450 group I signature 388 406 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g0268 541 PRINTS E-class P450 group I signature 431 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g0268 541 PRINTS E-class P450 group I signature 481 504 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g0268 541 PRINTS E-class P450 group I signature 326 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g0268 541 PRINTS P450 superfamily signature 389 400 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g0268 541 PRINTS P450 superfamily signature 472 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g0268 541 PRINTS P450 superfamily signature 337 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g0268 541 PRINTS P450 superfamily signature 481 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g0268 541 SUPERFAMILY Cytochrome P450 69 535 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g0268 541 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 474 483 IPR017972 GO:0005506|GO:0016705
Glsi02g0268 541 CDD CYP78 102 528 - -
Glsi02g0268 541 Pfam Cytochrome P450 70 510 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g0268 541 PANTHER CYTOCHROME P450 78A7-RELATED 9 536 - -
Glsi02g0268 541 FunFam Cytochrome P450 78A5 61 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0268 Glsi-ChrGlsi02 1716765 1718471 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0268 3 534 Cytochrome P450 AT5G09970 69.216 0.0 755