Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0209 ATGGGAAAGAAGCAATCGTTGAGGAGCAAAGCAGCTCACCTTGTATCGGACCTCACCACTGTCCTTCTGAACCCAATCTCTGATAAACCCTCCAAATCCCCTCCACCTCCTTCTGTAAGTTCTCAGGAAGAAGAGGGCAAGTCAGATAGAACTGAATCGGAGACAACTATTCGAGATGGTAGCCAGGATGTAATTGATGGGCCTGATACTTCATCCTTCTCTGCATTCCTCTATTCATTTTTGTCTTCCTCAGATACTGGAGATAATGCAAACTCAGAGGGGCCAAATCACAATAAAATTGGAACGGATATCCCTCCACCAGACGCAGTCATGAAGGAAAATAATGGAAAGAAAAGTTTGTTTTCTAGGGGTAAGCAATCACTCGGTAGAGCAATAAGCCAAGCTGCCAGAATCAGCGGATTTCGCTATCACGAGAGCAAGGATGATTTTGAAATGAGATTGGATGATGGACATAATTCTAAATTTTCGAGTGTTGAGATGAGGCATATTCAACCTGTGGAAGAGCCTGTGCCTTTGATTGATCTACCAGAAATTTCTGAACCTTCGGTGCTCATTTCAGAGAAAATAAGAAATTCTCTCTATGCTTCACTTCCAGCTCTTATTCACGGGAGGAAATGGATGCTGCTATACAGTACGTGGAGGCACGGTATATCACTTTCAACTCTGTATCGGAGAAGCATGCTTTGGCCTGGCTTGAGTTTGCTGGTTGTTGGAGACCGTGAAGGAGCAGTTTTTGGTGGCTTGGTTGAAGCACCTCTAAGACCATCCAACAAGAGAAAATACCAGGGAACAAATAATACATTTGTTTTCACAAATACCCCTGGTCATCCTGTTATATATCGTCCAACAGGGGCAAACCGCTATTTCACACTATGCACCACTAACTTTCTAGCAATTGGTGGCGGAGGTCATTTTGCGCTTTATTTGGATGGTGATCTATTGAACGGTTCTAGTTCAGTCTCAGAAACTTACGGAAATCCTTGCCTTGCACATTCTCAGGACTTTAAAGTGAAGGAAGTAGAGTTGTGGGGTTTTGTATATGCTTCAAAGTATGAGGAAGTTTTAGCATTGAGCAGAACAGAGGCGCCTGGGATCTGTCGATGGTAA 1128 0.4353 MGKKQSLRSKAAHLVSDLTTVLLNPISDKPSKSPPPPSVSSQEEEGKSDRTESETTIRDGSQDVIDGPDTSSFSAFLYSFLSSSDTGDNANSEGPNHNKIGTDIPPPDAVMKENNGKKSLFSRGKQSLGRAISQAARISGFRYHESKDDFEMRLDDGHNSKFSSVEMRHIQPVEEPVPLIDLPEISEPSVLISEKIRNSLYASLPALIHGRKWMLLYSTWRHGISLSTLYRRSMLWPGLSLLVVGDREGAVFGGLVEAPLRPSNKRKYQGTNNTFVFTNTPGHPVIYRPTGANRYFTLCTTNFLAIGGGGHFALYLDGDLLNGSSSVSETYGNPCLAHSQDFKVKEVELWGFVYASKYEEVLALSRTEAPGICRW 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0209 375 MobiDBLite consensus disorder prediction 43 59 - -
Glsi02g0209 375 MobiDBLite consensus disorder prediction 23 69 - -
Glsi02g0209 375 MobiDBLite consensus disorder prediction 85 115 - -
Glsi02g0209 375 SMART 109ultra 189 353 IPR006571 -
Glsi02g0209 375 PANTHER NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED 16 354 - -
Glsi02g0209 375 Pfam TLD 215 352 IPR006571 -
Glsi02g0209 375 ProSiteProfiles TLDc domain profile. 190 353 IPR006571 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0209 Glsi-ChrGlsi02 1357756 1361537 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0209 212 361 EF-hand Containing Proteins AT5G06260 33.125 6.72e-17 79.0