Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0194 ATGCACCCCAGCTGTAATACCTTTGCCTTTGCCCTTGCCCGAACTCCTGCATTAGTTAACCAATGCCGGATGTACACAGCCAAAATGGCAAAGCCAAACTACCATGAACAAATGGGCAAGCTAACGTATCACTGCAATGGAGCTTTCAGAGCAATTGATGGGCAGATTGGGATAATCCATCAAGCACCAACGGGAGCTCTAATTTCTCTTGCTAAACTGCTAATTATTCCTCTCGTTTCTCAAGTGGCTTGCTTTTGTCCTTTTGCATTTCCTGATACACAAGGAGAAGGATATGCACTATTTGCATTGAAGATATCATTGAATGCTTCATCCAATCAGCTTACTGACTGGAATGAAGATCAAGTTAACCCTTGTACCTGGTCTCATGTTTATTGTGACCAAAATTATAGTGTTGTTCAAGTTCAACTACCATTTATGGGATTTATAGGATTCCTGACCCCAAGAATAGGAGCTTTAAAAAGTCTTACAACTCTTTCTTTGCAAGGGAATGGCATTACTGGTGACATACCAAATGAATTAGGAAATCTGACTAACTTGATCAGGTTGGATTTGGAAAGCAACAGATTAACTGGTGAAATACCATCTTCCCTTGGTAAACTTCAAAAGCTTCAATTCTTGAGTTTGAGTCAAAACAATCTCAGTGGGACTATTCCTGAATCACTTGCCAGCCTCCCTGACTTGAGCAACATTCTGCTGGATTCAAATGATCTCAGTGGTCAAATTCCCGAACAGTTATTCAAAGTTCCTAAATACAATTTTACAGGAAACAAGTTGAATTGTGGCACGCATAGTCATCATGCTTGTGCATCTGATAGCACATATCAAGGTTCCCCACATAAACCAAAGATTAGCCTTATAGTAGGAATTGTTGTAACATTAGTTATTATTATTTTTCTTGGTGGCCTGCTGTTCTTCTGGTGCAAGGGTAGACACAAGGGCTACAAGCGGGAAGTTTTCGTAGATGTGGCAGGTGAAGTTGATGGGCAGATTGCATTTGGTCAACTAAAAAGATTTGCATGGAGACAACTACAGATAGCTACAGAAGACTTCAGTGAGAAAAATGTTTTAGGACAGGGAGGCTTTGGGAAGGTTTATAAAGGTATTCTTGCAGATAACACAAAGGTTGCTGTCAAAAGGTTAACTGATTATGAGAGTCCCGGGGGAGATGCAGCTTTTCAGCGGGAAGTTGAGATGATAAGTGTTGCTGTTCACAGGAATCTCTTACGGCTGATTGGATTTTGTACTACTCCAACAGAGCGCCTCTTAGTTTATCCCTTCATGCAGAACTTAAGTGTTGCCTATTGCCTACGAGAACTTAAACCTGGGGAACCTGTTTTAGATTGGCCTACAAGAAAACGAGTGTCTTTGGGCACTGCCCGTGGCCTAGAATATCTTCATGAGCATTGCAATCCTAAGATTATCCATCGGGATGTGAAGGCAGCTAATGTATTACTAGATGAAGATTTTGAGGCAGTTGTTGGTGACTTTGGTTTGGCAAAGCTAGTCGATGTTCGAAAAACTAATGTGACTACTCAAGTTCGTGGGACAATGGGCCACATAGCTCCTGAATACTTGTCCACTGGGAAATCTTCAGAAAGAACTGATGTTTTTGGCTATGGGATTATGCTTTTGGAGCTTGTTACAGGCCAACGGGCAATTGACTTTTCACGCTTGGAAGAGGAAGATAATGTGCTATTGCTTGACCATGTTAAGAAACTGGAACGGGAAAAAAGACTAGATGCTATTGTTGACCACAACCTAAATAAAAATTACAACATACAAGAGGTTGAAATGATGATAAAAGTTGCATTGCTCTGCACACAAGCAGTGCCAGAGGACCGTCCAGCAATGTCAGAGATTGTAAGAATGCTAGAAGGAGAAGGGCTGGCTGAAAGGTGGGAGGAATGGCAGCATGTGGAGGTGACTCGGAGGCAAGAATATGAGAGACTACAAAGAAGATTTCACTGGGGAGAAAATTCAGTTCATTACCAAGAAGCCATTGAGTTGTCTGGCGGGAGATAA 2043 0.417 MHPSCNTFAFALARTPALVNQCRMYTAKMAKPNYHEQMGKLTYHCNGAFRAIDGQIGIIHQAPTGALISLAKLLIIPLVSQVACFCPFAFPDTQGEGYALFALKISLNASSNQLTDWNEDQVNPCTWSHVYCDQNYSVVQVQLPFMGFIGFLTPRIGALKSLTTLSLQGNGITGDIPNELGNLTNLIRLDLESNRLTGEIPSSLGKLQKLQFLSLSQNNLSGTIPESLASLPDLSNILLDSNDLSGQIPEQLFKVPKYNFTGNKLNCGTHSHHACASDSTYQGSPHKPKISLIVGIVVTLVIIIFLGGLLFFWCKGRHKGYKREVFVDVAGEVDGQIAFGQLKRFAWRQLQIATEDFSEKNVLGQGGFGKVYKGILADNTKVAVKRLTDYESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYCLRELKPGEPVLDWPTRKRVSLGTARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDNVLLLDHVKKLEREKRLDAIVDHNLNKNYNIQEVEMMIKVALLCTQAVPEDRPAMSEIVRMLEGEGLAERWEEWQHVEVTRRQEYERLQRRFHWGENSVHYQEAIELSGGR 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0194 680 FunFam Somatic embryogenesis receptor kinase 1 326 433 - -
Glsi02g0194 680 FunFam Somatic embryogenesis receptor-like kinase 1 434 651 - -
Glsi02g0194 680 Gene3D Transferase(Phosphotransferase) domain 1 434 651 - -
Glsi02g0194 680 FunFam Putative LRR receptor-like serine/threonine-protein kinase 91 277 - -
Glsi02g0194 680 Pfam Leucine rich repeat N-terminal domain 96 133 IPR013210 -
Glsi02g0194 680 SUPERFAMILY L domain-like 97 265 - -
Glsi02g0194 680 Gene3D Ribonuclease Inhibitor 93 276 IPR032675 -
Glsi02g0194 680 Pfam Protein kinase domain 358 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g0194 680 ProSiteProfiles Protein kinase domain profile. 357 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g0194 680 Gene3D Phosphorylase Kinase; domain 1 326 433 - -
Glsi02g0194 680 SUPERFAMILY Protein kinase-like (PK-like) 339 632 IPR011009 -
Glsi02g0194 680 ProSitePatterns Serine/Threonine protein kinases active-site signature. 480 492 IPR008271 GO:0004672|GO:0006468
Glsi02g0194 680 SMART serkin_6 357 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g0194 680 ProSitePatterns Protein kinases ATP-binding region signature. 363 385 IPR017441 GO:0005524
Glsi02g0194 680 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 83 642 - -
Glsi02g0194 680 Pfam Leucine rich repeat 185 244 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0194 Glsi-ChrGlsi02 1260275 1272120 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0194 67 680 Receptor kinase-like Gene Family AT5G10290 74.104 0.0 908
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Glsi02g0194 Pkinase 1e-42 CL0016