Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0126 ATGTTATTGAGGCCACCCAAGATTCTCAAACACTATGGTTCATGGGCTATAATTACTGGTTCGACCAATGGAATTGGCAAAGCCCTCGCCTTTGAATTGGCATGTAAAGCACTTAACCTTGTATTGTGTGTGGTCATGGACCTGCAAAATATTAATGGAGAGGAAATCATTAAAAGGGTAGAGGAAGCAACAGAAGGTTTGGATGTAGGTATGTTGATTAATAACGCTGGATTGGGAGAACCTTATCCTAGATACTTTCACGAGAATGGTGGATGCTATTATCAAGATATCTTGCAATGTTGTCAAGATGCACAAGCTTGGAATACAGAGCACATTGAATTGACATCCAGTGTCATTTTGTTCAAGGCCCTCTCTTATTTTGATGTTATGGGTACCACTATATGTGGTGACAAAGATGACAAATATGAAGGCGTCTCTGTTGATTCCAACCCCGGAGATGTACAGCAGAGCCAGTTATGA 480 0.4083 MLLRPPKILKHYGSWAIITGSTNGIGKALAFELACKALNLVLCVVMDLQNINGEEIIKRVEEATEGLDVGMLINNAGLGEPYPRYFHENGGCYYQDILQCCQDAQAWNTEHIELTSSVILFKALSYFDVMGTTICGDKDDKYEGVSVDSNPGDVQQSQL 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0126 159 Gene3D - 10 125 - -
Glsi02g0126 159 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 13 121 IPR036291 -
Glsi02g0126 159 PRINTS Glucose/ribitol dehydrogenase family signature 67 78 IPR002347 -
Glsi02g0126 159 PRINTS Glucose/ribitol dehydrogenase family signature 15 32 IPR002347 -
Glsi02g0126 159 PANTHER RH59310P 3 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0126 Glsi-ChrGlsi02 848674 849567 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0126 2 88 Lipid Metabolism Gene Families AT1G67730 49.107 1.37e-27 103
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi11g2826 11 21469691 21475874 Glsi02g0126 02 848674 849567 CCT
Glsi02g0126 02 848674 849567 Glsi02g0126 02 848674 849567 ECH