Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0121 ATGGGTTTATTTTCTCTCTTTCTGGTTATAATATCTTCTCTTCTAGCATCATCTGCGGTTTGCCAAGTTACAGAGTTCATCAGCATAGACTGTGGAGGCACAAGTAATTACACTGATAGAAGCACAGGACTAGAATGGATTTCAGACTCTGGGGTCATGAACCATGGCACTCCAGTGGAAGTAGAAAGTCCGAATGGAAACAGGGTGCAGTATCAGAGACGCCGAGACTTTCCCATAGACAACAAGAAATACTGTTATACACTAATAACCGAGGAGAGAAGAAGATACCTGGTACGAGCAACGTTTCAGTATGGCAGCTTGAAAAATGGAGACACATACCCCCAGTTTCAGCTCCACTTGGACGCAACTAAGTGGGCTACTGTGTCAATATCAGATGCCTCGAGAATATATGTAAAGGAAATGATCATCAGGGCACCCTCAAACTCCATCGATGTGTGCATGTGCTGCGCTACCACTGGTTCTCCATTCATATCAACTCTAGAGTTGCGGCCATTGAATCTTTCTATGTATGCAACAGATTTCGAAGACAATTTCTTCTTAAAAGTAGCCGCAAGAATAAACTTCGGTGCCACAAGCGAGGATGCTATCAGGTATCCTGATGACCCGTATGATAGAATTTGGGAATCTGATCTTATCAAAAGGCAAAATTATCTTGTTGGGGTGGCCTCAGGCACAGAAAGAATTAATACAACAAAGAACATAGAAATAGGGACAAGAGAATACCCGCCGGTCAAAGTTATGCAAACTGCAGTTATTGGCATAAAAGGGGTACTCAGCTACAGATTAAACCTGGAAGACTTCCCTGCCCATGCTCGAGCTTATGCATATTTCGCTGAGATTGAAGATCTGGGTAAGAATGAGAGTCGAAAATTCAAATTGCAGCAACCTTATATACCTGACTATAGCAATGCAGTGGTTAACATAGCTGAGAATGCCAATGGGAGCTATACTCTTTATGAACCTAGTTACATGAATGTGACTCTGGATTTTGTTCTGTCATTCTCCTTTGTTAAGACCCGGGATTCTACTCGAGGACCACTTCTAAATGCCATGGAAATAAGCAAATACGTACAGATTGCTTCGAAGACTGACAGGCAAGATTTGACTGTTGTAAATGCATTTCGCCTCATGTCTGCTGGAAGTCTCCAGATGAGCGATGGTGATCCTTGTGTTCCAACTCCCTGGGAGTGGGTACATTGTAGTGCCACCCCTCTGCCAAGAATTACAGAAATAAACTTGTCGAGAAGGAATGTGAAGGGCGAAATCCCATCTGAGCTCAACAACATGGAAGAATTGAATGAGTTGTGGTTAGACGGAAACTTGATTACGGGGCCACTACCTGACATGAGCAATCTTATAAATCTAAAGATTGTGCATCTAGAGAACAACCAATTGACTGGTCCACTACCATCTTACCTGGGTAGTTTGCCAAGCTTACAAGCACTGTTCATACAAAATAACTCGTTTAGTGGGGAAATACCTGCAGGATTAGTATCTGGAAAAATCATTTTCAACTATGATGGTAATCCCGGCCTACATAAAGCGAACAAGAAACACTTTAAGTTGATACTGGGAATTTCCATCGGAGTACTTGTGATTCTATCAATATTATTTTTAGGAAGTTTGGTGCTAATGCATAACCTTCGAAGAAAGGCATCTCTGCAGAAGAGTGATGAAAATGGTATTTCTGGATGCGGTAGAACTAAACCTGTAACTCCATACTCGTCTGTTCGGGGAGGGAATCTAATGGAGGAAGGTATTGCTTGCTATATTGGGCTCGCAGAGTTGACAGAAGCTACTAATAATTTTTCAAAGAAAATCGGCAAAGGAAGCTTTGGATCTGTCTACTATGGGAAAATGAGAGATGGAAAAGAGGTGGCAGTTAAAACTATGACTGATTCATCCAGCCATGGGAACCAGCAATTTGTGACAGAGGTAGCCCTTCTGTCAAGAATTCATCACAGAAACTTGGTTCCTTTGATTGGATATTGTGAAGAAGAATATCAGCATATTCTGGTTTACGAGTTCATGCACAATGGCACCTTACGGGATCACATTCATGATTCTGCTAAGGAGCAGCAGTTAGACTGGTTAGTTCGTCTTCGCATTGCAGAAGATGCCGCTAAAGGTCTTGAATACTTACACACAGGATGCAATCCAAGCATCATACACCGAGATGTAAAGACAAGCAATATTCTCCTAGACATCAATATGAGAGCAAAAGTGTCAGATTTTGGACTCTCCAGGCTAGCTGAAGAAGATCTAACCCATATATCAAGTATTGCACGGGGAACAGTAGGCTACCTGGATCCTGAGTACTACGCAAATCAACAATTGACGGAGAAAAGTGACGTATATAGTTTTGGAGTTGTCCTGCTGGAGCTGATATCAGGAAGAAAACCTGTGTCATCAGAAGATTATGGTGCTGAAATGAATATTGTTCACTGGGCTAGATCTTTAATTCGTAAGGGGGATGTGATGAGCATCATGGATCCTTGTCTAACTGGAAGTGTGAAGACAGAGTCCATTTGGAGGGTTGCTGAAATTGCTATGCAATGTGTAGAACAACACGGCGTCTCCAGGCCCAGGATGCAAGAGATCATTTTGGCTATACAAGATGCTGTCAAGATTGAAAAAGGAACAGATAGTAAGCTCAAATTATCATCTTCCGCCTCTTCCAAAGCTCAATCTTCTCGAAAAACTTTACTCACAAGCTTTCTCGAGATTGAGAGCCCTGACTTGTCTAACGGTTGCCTCCCATCAGCAAGATAA 2793 0.4221 MGLFSLFLVIISSLLASSAVCQVTEFISIDCGGTSNYTDRSTGLEWISDSGVMNHGTPVEVESPNGNRVQYQRRRDFPIDNKKYCYTLITEERRRYLVRATFQYGSLKNGDTYPQFQLHLDATKWATVSISDASRIYVKEMIIRAPSNSIDVCMCCATTGSPFISTLELRPLNLSMYATDFEDNFFLKVAARINFGATSEDAIRYPDDPYDRIWESDLIKRQNYLVGVASGTERINTTKNIEIGTREYPPVKVMQTAVIGIKGVLSYRLNLEDFPAHARAYAYFAEIEDLGKNESRKFKLQQPYIPDYSNAVVNIAENANGSYTLYEPSYMNVTLDFVLSFSFVKTRDSTRGPLLNAMEISKYVQIASKTDRQDLTVVNAFRLMSAGSLQMSDGDPCVPTPWEWVHCSATPLPRITEINLSRRNVKGEIPSELNNMEELNELWLDGNLITGPLPDMSNLINLKIVHLENNQLTGPLPSYLGSLPSLQALFIQNNSFSGEIPAGLVSGKIIFNYDGNPGLHKANKKHFKLILGISIGVLVILSILFLGSLVLMHNLRRKASLQKSDENGISGCGRTKPVTPYSSVRGGNLMEEGIACYIGLAELTEATNNFSKKIGKGSFGSVYYGKMRDGKEVAVKTMTDSSSHGNQQFVTEVALLSRIHHRNLVPLIGYCEEEYQHILVYEFMHNGTLRDHIHDSAKEQQLDWLVRLRIAEDAAKGLEYLHTGCNPSIIHRDVKTSNILLDINMRAKVSDFGLSRLAEEDLTHISSIARGTVGYLDPEYYANQQLTEKSDVYSFGVVLLELISGRKPVSSEDYGAEMNIVHWARSLIRKGDVMSIMDPCLTGSVKTESIWRVAEIAMQCVEQHGVSRPRMQEIILAIQDAVKIEKGTDSKLKLSSSASSKAQSSRKTLLTSFLEIESPDLSNGCLPSAR 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0121 930 PANTHER OS07G0107800 PROTEIN-RELATED 27 882 - -
Glsi02g0121 930 Gene3D Ribonuclease Inhibitor 372 516 IPR032675 -
Glsi02g0121 930 Pfam Protein tyrosine and serine/threonine kinase 610 875 IPR001245 GO:0004672|GO:0006468
Glsi02g0121 930 SUPERFAMILY L domain-like 398 505 - -
Glsi02g0121 930 ProSitePatterns Protein kinases ATP-binding region signature. 614 636 IPR017441 GO:0005524
Glsi02g0121 930 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 408 506 - -
Glsi02g0121 930 ProSitePatterns Serine/Threonine protein kinases active-site signature. 729 741 IPR008271 GO:0004672|GO:0006468
Glsi02g0121 930 Gene3D Phosphorylase Kinase; domain 1 595 683 - -
Glsi02g0121 930 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 684 891 - -
Glsi02g0121 930 Pfam Malectin-like domain 29 362 IPR024788 -
Glsi02g0121 930 SMART serkin_6 608 883 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g0121 930 SUPERFAMILY Protein kinase-like (PK-like) 598 875 IPR011009 -
Glsi02g0121 930 ProSiteProfiles Protein kinase domain profile. 608 882 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g0121 930 Gene3D Transferase(Phosphotransferase) domain 1 684 903 - -
Glsi02g0121 930 CDD STKc_IRAK 614 875 - -
Glsi02g0121 930 FunFam serine/threonine-protein kinase PBS1-like 585 683 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0121 Glsi-ChrGlsi02 823272 828660 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0121 1 930 Receptor kinase-like Gene Family AT1G67720 68.917 0.0 1303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Glsi02g0121 Malectin_like 6.5e-89 CL0202