Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0117 ATGAAGTTAGAGGTGGAAGTAGTCTCGAAAGAAATCATCAAACCCTCTTCTCCAACACCAGACCATCTTCGACGTTACCAACTCTCTTTTCTCGATCAAATCTCCCCCTTAGTCTATAACCCTTTGGTCATCTTTTACGCTCGCGATGATAGTACAAGCCGGTACTTCAACAACAACACTACCACCACCATTTCCAACCGCCTAAAAAAATCCTTGTCAGAAGTGTTAACCCATTATTACCCGCTTGCTGGCCGAGTCATAGGCAAGAGCTTCATAGACTGCAATGACGAGGGCATCCCCTACTCTGAAGCCAGAGTGAAGTCCCAACTCTTAGATGTTATTCACAAACCAGTACCTAATGAACTCAACCATTTCATTCCATTTCAACTAGACAATGTCTCTGATATAACCTTTGGTGTCCAATTCAATGTTTTTGATTGTGGTGGCATTGCAATTGGTGCCTGTCTTTCTCATCAGATTGCAGATGGTTTATCGTTCTTCACGTTTCTCAATAGTTGGGCAGCCATTGCTAGGGGGCAAGCTGCGTTAACAAATCCAAATTTCGTCTCAGCTAATCTCTTCCCACCCAAAGATACATCTGGGTTTGATCCTAGATCTGGGATCATAAAGGACAACATTATCTCCAAGAGGTTTGTGTTCGATGCTTCAGTTATCGAAGCTCTTAGGGCGAAATATACTAATAGCCCAAACCTCGAAAACGAAAAGCTCCCATCCAGAGTGGAGGCCTTATCAGCTTTCATATGGAGTCGTTACGTGGCTGTGACGACTCAAGAGAAATCTAGCCCACAGAGAACATACGCTGTGGTTCACGCCGTGAACCTGCGTCCGAGGATGGAACCACCGCTGCCTGCGACTTCCTTTGGAAACTATTACAGGTTCACTGTGACGATTCCATCGTTGAAAGGTGAAGAAGAGTGTTATGGGACGATTGTGAAGCAGGTAAAGGAGCAAATAAAGAAGATAGACAAGGATTATGTGAGAAAACTCCAAGAAGGTGCCAGCCAACATTTGGATTTCCTAAAGGATAGTTCGCATAGAGTGCTAGTGAAGGGGGAGGTGGTTTCCTTTAGCTTCACTAGTTTATGTAGGTTTCCTTTGTACGATGCTGATTTTGGTTGGGGGAAACCTACGTGGGTAGGCTCACCTGCGTTAACTTTTAAGAATCTGGTTGTGTTTATTGACACCAAGACGGGTGGTGGCATAGAAGCTTACATTAGCTTGAAGGTGGAAGACATGGCCAAGTTTGAAGCAGACAAGGAGTTTCTTGCATGTGTTAATAAAACAGCGACCTTTTGA 1317 0.4427 MKLEVEVVSKEIIKPSSPTPDHLRRYQLSFLDQISPLVYNPLVIFYARDDSTSRYFNNNTTTTISNRLKKSLSEVLTHYYPLAGRVIGKSFIDCNDEGIPYSEARVKSQLLDVIHKPVPNELNHFIPFQLDNVSDITFGVQFNVFDCGGIAIGACLSHQIADGLSFFTFLNSWAAIARGQAALTNPNFVSANLFPPKDTSGFDPRSGIIKDNIISKRFVFDASVIEALRAKYTNSPNLENEKLPSRVEALSAFIWSRYVAVTTQEKSSPQRTYAVVHAVNLRPRMEPPLPATSFGNYYRFTVTIPSLKGEEECYGTIVKQVKEQIKKIDKDYVRKLQEGASQHLDFLKDSSHRVLVKGEVVSFSFTSLCRFPLYDADFGWGKPTWVGSPALTFKNLVVFIDTKTGGGIEAYISLKVEDMAKFEADKEFLACVNKTATF 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0117 438 Gene3D - 210 432 IPR023213 -
Glsi02g0117 438 Gene3D - 1 202 IPR023213 -
Glsi02g0117 438 Coils Coil 318 338 - -
Glsi02g0117 438 PANTHER F21J9.9 6 432 - -
Glsi02g0117 438 Pfam Transferase family 4 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0117 Glsi-ChrGlsi02 800478 801794 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0117 3 423 Monolignol Biosynthesis Gene Families AT5G48930 27.093 7.39e-36 135