Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0116 ATGTATCATAAGGTTGGTGATGCCTCCACTCTCTTCAACTTCGTCAAAGACTGGGCTACCATAACCAGAAACTCTGGCGAAGAAGAAGAAAAACTAATAATCCCCGTACTTGATGGGGCATCAGTTTTCCCACGTGGGGATTTACTTTTCCCCGAACTTGATTTTGTCCGTGAAATTACGGTATGCAAAAGGTTTGTATTTGATGCCTCAAAGATTGAGTCCCTTAAGGCCATGGTGTCCCGCAGAGCGGGAAACCCCACAAGAGTACAAGTTGTGACTGCACTTATCTACAAATCTGCAGTTTCTGCCATGAGATCAACTTTAAAGTCTCCAAACAAAACCAATTATTTGCTCCGCTTTTCAGCGAACCTGAGTACAAGAATGGTTCCTCCACTGCCAGAAAAGTCGATAGGAAATATGGTTTGGTCTTTCTTCCGTACCCAGAGAAAGGAGTTGTCATACTTCTCAGAGTGCCTAAAAGCAGCAATATCAGTGAGGCCAGACTTCCATGTTTCGAGTTGGTGCAGATTTCCAACGTATGAATCGGATTTTGGGTGGGGGAAACCAAAATGGGTGACTACTTGCAGACATCCCGTGAAGAACAACATAATTTTGATGGATACAAGAGATGGGGGGATTGAAGCGCTGGTAAACATGGAAGAGAGGGACATGGCCTTGCTTGAGCGGAATGTGGAACTCCTTCATTATGGTTCCCTTAATCCAAGTGTTGGGCTTTGA 738 0.4458 MYHKVGDASTLFNFVKDWATITRNSGEEEEKLIIPVLDGASVFPRGDLLFPELDFVREITVCKRFVFDASKIESLKAMVSRRAGNPTRVQVVTALIYKSAVSAMRSTLKSPNKTNYLLRFSANLSTRMVPPLPEKSIGNMVWSFFRTQRKELSYFSECLKAAISVRPDFHVSSWCRFPTYESDFGWGKPKWVTTCRHPVKNNIILMDTRDGGIEALVNMEERDMALLERNVELLHYGSLNPSVGL 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0116 245 PANTHER F21J9.9 1 235 - -
Glsi02g0116 245 Pfam Transferase family 167 233 - -
Glsi02g0116 245 Pfam Transferase family 2 149 - -
Glsi02g0116 245 Gene3D - 1 54 IPR023213 -
Glsi02g0116 245 Gene3D - 55 239 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0116 Glsi-ChrGlsi02 793872 794697 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0116 167 229 Monolignol Biosynthesis Gene Families AT5G48930 29.231 8.70e-07 47.4