Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0113 ATGCCCTTTTGCCCTTTACTACTATTGCTCCCCACCTCTCTCACTTCGTCTGAATTTCATTTCTGTTTGAATGCACTGAGCATAGCATCCATTCGATTCAACTCTAACAACATGTATTTATCAGAAAAGCCCCGCCCTATCGACTTCTACAAAGAAGAAGGGAGCCGAGACATGATGATCGAGGTTGTCTCCAATGGCGAACTCCCACCACCTCACCAACCACCCCCTCAGCATCAAATGATCCTTGGCGAGAGTAGTGGGGAGGACCACGAAGTTGAGATCAAGGCACCCAAGAAGCGTGCTGAGACTTGGGTTCAAGACGAGACACGGAGTTTGATTGCCCTTCGCCGTGAGATGGATGGTCTCTTTAATACCTCCAAATCCAACAAACATCTGTGGGAACAAATTTCCGCAAAGATGAGAGAGAAGGGATTCGATCGTTCGCCCACTATGTGCACCGATAAATGGAGAAATCTTTTGAAGGAGTTCAAGAAGGCTAAGCACCAAGATAGGGGAAGTGGGTCTGCCAAGATGTCCTATTATAAAGAGATTGAGGAGATTCTGAGGGAGAGGAATAAGAGCATGCAGTACAAGAGCCCTACTCCTCCTAAGATTGATTCTTTTATGCAATTTGCCGATAAAGGTATTGAGGATACCAGCATATCTTTTGGTCCTGTTGAAGCTACTGGCAGACCAACACTCAATCTTGAGAGACGTTTGGATCATGATGGACATCCTCTCGCCATCACCACAGCTGATGCTGTTGCAGCAAGTGGAGTTCCTCCTTGGAATTGGAGAGAAACAACTCCTGGAAATGGTGGGGAAGGTCAGTCATGTTGTGGGAGGGTTATATCAGTCAAATGGGGAGATTATACAAGAAGAATAGGTATTGACGGCACTTCAGAAGCCATCAAGGAGGCAATAAGAGCTGCTTTTAGGTTGAGAACTAGACGTGCATTTTGGTTGGAGGATGAAGACCAGATAATCAGAAGTATTGACCGTGACATGCCTTTAGGAAATTACACTCTTCACCTAGATGAAGGAATGGCCATTAAAGTATGCCTCTATGATGAGTCTGACCATATCCCCGTGCATACTGACGATAAGATCTTTTACACTGAGGATGATTACCGCGATTTTCTGACACGCCGGGGCTGGACAAGTCTAAGGGAATTTGATGGCTATAGAAACATTGATAATATGGATGATCTTCGACCTGGTGCCATATACCGTGGTGTGAGTTGA 1245 0.4554 MPFCPLLLLLPTSLTSSEFHFCLNALSIASIRFNSNNMYLSEKPRPIDFYKEEGSRDMMIEVVSNGELPPPHQPPPQHQMILGESSGEDHEVEIKAPKKRAETWVQDETRSLIALRREMDGLFNTSKSNKHLWEQISAKMREKGFDRSPTMCTDKWRNLLKEFKKAKHQDRGSGSAKMSYYKEIEEILRERNKSMQYKSPTPPKIDSFMQFADKGIEDTSISFGPVEATGRPTLNLERRLDHDGHPLAITTADAVAASGVPPWNWRETTPGNGGEGQSCCGRVISVKWGDYTRRIGIDGTSEAIKEAIRAAFRLRTRRAFWLEDEDQIIRSIDRDMPLGNYTLHLDEGMAIKVCLYDESDHIPVHTDDKIFYTEDDYRDFLTRRGWTSLREFDGYRNIDNMDDLRPGAIYRGVS 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0113 414 FunFam trihelix transcription factor GT-1 104 166 - -
Glsi02g0113 414 CDD GT1 102 167 - -
Glsi02g0113 414 ProSiteProfiles Myb-like domain profile. 96 160 IPR001005 -
Glsi02g0113 414 PANTHER FI21293P1 79 412 - -
Glsi02g0113 414 Pfam Myb/SANT-like DNA-binding domain 103 187 IPR044822 -
Glsi02g0113 414 SMART sant 100 162 IPR001005 -
Glsi02g0113 414 Gene3D - 104 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0113 Glsi-ChrGlsi02 773671 779045 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0113 38 413 Trihelix Transcription Factor Family AT3G25990 69.666 0.0 525
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Glsi02g0113 Myb_DNA-bind_4 7.6e-21 CL0123