Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0102 ATGGCGGCTGGGAGACATGGGGCTTATTGCGACAATGAGTATAGGGAACGCGAGTCCAATTTTCATGTTTCAAGGCGGGTTTCTACTAATTCTAAAGATGACAATGATCGGATTAGGAATGGTAGCCGTGATGCTGTGAGGGGTCCGAATAGAGATAGAATTAGGTTAAGACAGAAAGATATTAGGGAGAAGGAGAGGTTAAATGACAGTTACAAGTCATCTTCGAGTAGAAGCAACTCGGGAAGCAGTGGTGGGGGCCTTGGTCCCAGACGATGTGGTTTTTCCGCCAAGACTATGGATAGGGAGCCAGGTGAGCTTTCCAGTGAGAGTGGGTCTGATGATGCTATTGAATCAGAAACACAGGGGGAAGACTGTGAGGATGCAAAGGTTGAAGAAAATGGGACTCGATGTCCACTGGAGAAGAAAAGGAAATTTTCACCAATAGTATGGGATCAGGATGGCAAGGAAAAGAATAATTCTTCTAAAATTAGGGTTGGCACAACAGTGAATCCTCTTCTTCCTTTACCTCCACTGCCAAAAGCATTCGGTCAGTCACCCAACCCTCCATTTGGTGGAGTTGAAATACATCTCATCAGAAGTAGAGAAACTGAAAATTTTGAGTTGTCGACCACAGTTAAGCTTCCTCTGCCCTCTGAGATGGTTCAGGATGCTGAATCTGAGTTTCCTGTAAGATTTCATTCCATCTCACCAGAGCAGAGTTGGGGTAATAATCAGGAAGCTCTGCAACCAGAAGGGGAAGATTGTGTTCCAACTCGAAATATAGCGTCTTCAAGATGGGCTGCTGGAGATGACTCTCCGGGTGATGAAGGTGAAATCATAGATGATGAGGAAGTGCCCAAAAGGAGAAGGAGATCATCTCCTGAATTATTGGATACCAGGGTGAGAAACAAGCTGTTAAGCTCAGAAGAGTCTAAAAGAGAAGGTTCCGAAAAAGCTAGAGCATCTGAATCTGAAGAAAGAGGTAGCCATGGTAGAACGTCGTCTAGTGGGGCTGATCATCCTGGTATTGGATCAGATAAGGATGACTATATGGAGGTTGATGGTGAAGGTGGCAAAAGTGTTACTACTTTTAGTCATTCAGATACTGATTCTGAAGATGATGATGATCATCAGGAGACACCAGTGCCTCCAGCTCCACCCCAACGAGTTGTCAATATGCTTCAGGGTTGTAGAAGTGTGGATGAGTTTGAGAGACTAAACAAGATAGATGAAGGAACGTATGGTGTTGTATACAGGGCCAGAGATAAGAAGACTGGGGAAATTGTGGCATTGAAGAAAGTAAAGATGGAGAAGGAAAAAGAAGGCTTTCCATTGACTTCTCTTAGGGAAATAAACATTCTTCTTTCTTTTCACCACCCATCCATAGTTGACGTTAAGGAAGTGGTGGTAGGGAGTAACCTTGATAGTATTTTTATGGTGATGGAATACATGGAACATGATCTTAAAGGGCTTATGGAGGCAATGAAGCAGCCATTTAGCCAGAGTGAAGTAAAGTGCCTCATGCTACAGCTTTTAGAAGGTGTAAAGTATCTTCATGACAACTGGGTTCTTCATAGGGACTTGAAGACTTCGAACCTGCTTTTGAATAATAGGGGTGAGTTAAAAATTTGTGATTTTGGGTTGGCTCGTCAGTATGGGAGTCCATTGAAACCATATACACACCTGGTGGTTACTCTTTGGTACAGGGCACCTGAACTTCTTCTGGGGGCAAAACAGTATTCTACAGCCATTGACATGTGGTCTCTAGGCTGTATAATGGCTGAGCTACTGGCCAAGGAACCACTATTTAATGGGAAGACTGAAGTTGATCAACTTGACAAGATTTTCAGGACTCTTGGTACGCCAAATGAAACAATATGGCCTGGACTTTCTAAACTACCTGGAGTCAAGGTCAATTTTGTCAAGCACCAGTATAACCTCCTGCGTAAAAAATTTCCTGTCACATCATTCACTGGATCTCCAGTTCTCTCTGATTCTGGATTTGATTTGTTGAACAAGCTTCTTACTTATGACCCTGAAAAGAGGATCACAGCTGAAGCTGCTCTCAATCATGAGTGGTTCCTTGAAGTTCCTCTTCCGAAGTCTAAAGAATTTATGCCTACATTCCCTGCTCAACATGCTCAAGACAGGCGGATGCGAAGAATATTGAAGAGTCCGGATCCTTTAGAGGATCAGCGCCAGAAAGAGTTACAGCAAGGTCAATTAGGGACTGGGCCTTCAGTGCATTTCATTGATGAAGAAATTGACAGTAATATTGTGCTTATAAGGTCATGTCATGAAGATCATCAGAATCCTTACTGTGTTCATAAGTGCAGCTTGAGGGGTTTAGGGGACACCAAAATCTAA 2367 0.433 MAAGRHGAYCDNEYRERESNFHVSRRVSTNSKDDNDRIRNGSRDAVRGPNRDRIRLRQKDIREKERLNDSYKSSSSRSNSGSSGGGLGPRRCGFSAKTMDREPGELSSESGSDDAIESETQGEDCEDAKVEENGTRCPLEKKRKFSPIVWDQDGKEKNNSSKIRVGTTVNPLLPLPPLPKAFGQSPNPPFGGVEIHLIRSRETENFELSTTVKLPLPSEMVQDAESEFPVRFHSISPEQSWGNNQEALQPEGEDCVPTRNIASSRWAAGDDSPGDEGEIIDDEEVPKRRRRSSPELLDTRVRNKLLSSEESKREGSEKARASESEERGSHGRTSSSGADHPGIGSDKDDYMEVDGEGGKSVTTFSHSDTDSEDDDDHQETPVPPAPPQRVVNMLQGCRSVDEFERLNKIDEGTYGVVYRARDKKTGEIVALKKVKMEKEKEGFPLTSLREINILLSFHHPSIVDVKEVVVGSNLDSIFMVMEYMEHDLKGLMEAMKQPFSQSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNRGELKICDFGLARQYGSPLKPYTHLVVTLWYRAPELLLGAKQYSTAIDMWSLGCIMAELLAKEPLFNGKTEVDQLDKIFRTLGTPNETIWPGLSKLPGVKVNFVKHQYNLLRKKFPVTSFTGSPVLSDSGFDLLNKLLTYDPEKRITAEAALNHEWFLEVPLPKSKEFMPTFPAQHAQDRRMRRILKSPDPLEDQRQKELQQGQLGTGPSVHFIDEEIDSNIVLIRSCHEDHQNPYCVHKCSLRGLGDTKI 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0102 788 Gene3D Phosphorylase Kinase; domain 1 388 485 - -
Glsi02g0102 788 MobiDBLite consensus disorder prediction 725 744 - -
Glsi02g0102 788 Gene3D Transferase(Phosphotransferase) domain 1 486 727 - -
Glsi02g0102 788 MobiDBLite consensus disorder prediction 19 170 - -
Glsi02g0102 788 FunFam Cyclin-dependent kinase G-2 486 725 - -
Glsi02g0102 788 CDD STKc_CDC2L1 397 694 IPR045267 GO:0004674|GO:0005524|GO:0006468
Glsi02g0102 788 PANTHER CELL DIVISION PROTEIN KINASE 401 700 - -
Glsi02g0102 788 ProSitePatterns Serine/Threonine protein kinases active-site signature. 523 535 IPR008271 GO:0004672|GO:0006468
Glsi02g0102 788 FunFam cyclin-dependent kinase G-2 isoform X1 388 485 - -
Glsi02g0102 788 SUPERFAMILY Protein kinase-like (PK-like) 395 700 IPR011009 -
Glsi02g0102 788 MobiDBLite consensus disorder prediction 281 333 - -
Glsi02g0102 788 MobiDBLite consensus disorder prediction 19 71 - -
Glsi02g0102 788 Pfam Protein kinase domain 403 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g0102 788 ProSiteProfiles Protein kinase domain profile. 403 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g0102 788 MobiDBLite consensus disorder prediction 127 160 - -
Glsi02g0102 788 SMART serkin_6 403 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g0102 788 MobiDBLite consensus disorder prediction 235 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0102 Glsi-ChrGlsi02 697194 703308 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0102 394 740 Core Cell Cycle Gene Families AT5G10270 45.333 1.07e-94 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Glsi02g0102 Pkinase 1.6e-75 CL0016