Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0095 ATGGTGAAGTACTCCAGAGAGCCCGACAATCCTACTAAGTCCTGCAAGGCTAGAGGCTCCGACCTTAGAGTCCATTTCAAGAACACTAGGGAGACAGCCTTTGCCATCAGGAAGTTGCCCTTGGCCAAGGCGAAGAGGTACTTGGAGGATGTGCTGGCTCACAAACAGGCCATTCCCTTCCGACGGTTTTGTCGCGGTGTTGGGAGGACGGCCCAGGCAAAGAACAGACATTCTAATGGACAAGGACGCTGGCCTGTCAAATCAGCAAAATTCATTCTTGATTTGCTTAAGAATGCTGAAAGTAATGCCGAAGTGAAAGGTTTGGACGTGGATGCTCTTTACATTTCTCACATCCAGGTTAATCAAGCACAGAAGCAAAGACGCCGCACCTACCGAGCTCATGGAAGAATCAACCCCTACATGTCATCTCCTTGCCATATAGAGTTGACATTATCTGAAAAGGAGGAGCCTGTCAAGAAGGAGCCGGAGACCCAGTTGGCAACAAACAAGAAGTCCCAAGTTCTTTGA 528 0.4886 MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAFAIRKLPLAKAKRYLEDVLAHKQAIPFRRFCRGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLSEKEEPVKKEPETQLATNKKSQVL 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0095 175 MobiDBLite consensus disorder prediction 153 175 - -
Glsi02g0095 175 NCBIfam 50S ribosomal protein L22 4 154 IPR005721 GO:0003735|GO:0006412|GO:0015934
Glsi02g0095 175 SUPERFAMILY Ribosomal protein L22 1 154 IPR036394 GO:0003735|GO:0005840|GO:0006412
Glsi02g0095 175 FunFam 60S ribosomal protein L17 1 174 - -
Glsi02g0095 175 CDD Ribosomal_L22 15 151 IPR001063 GO:0003735|GO:0005840|GO:0006412
Glsi02g0095 175 ProSitePatterns Ribosomal protein L22 signature. 127 151 IPR018260 GO:0003735|GO:0005840|GO:0006412
Glsi02g0095 175 Gene3D Ribosomal protein L22/L17 1 174 IPR036394 GO:0003735|GO:0005840|GO:0006412
Glsi02g0095 175 PANTHER 60S RIBOSOMAL PROTEIN L17 1 172 IPR005721 GO:0003735|GO:0006412|GO:0015934
Glsi02g0095 175 Pfam Ribosomal protein L22p/L17e 17 151 IPR001063 GO:0003735|GO:0005840|GO:0006412
Glsi02g0095 175 Hamap 50S ribosomal protein L22 [rplV]. 2 154 IPR005721 GO:0003735|GO:0006412|GO:0015934
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0095 Glsi-ChrGlsi02 637395 639979 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0095 1 171 Cytoplasmic Ribosomal Protein Gene Family AT1G27400 90.058 1.41e-116 326