Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0091 ATGGCGGACGAAGAGGAAGGGGGATTGACCAGACCAGAATTTCCGACGGGTCGAGTGAAGAAAATTATGAAGCTGGATAAAGACATACAGAGGGTTAACTCAGAAGCATTATTCCTGGTGTCGTGCTCCACCGAGCTCTTCCTACGATTCCTGGCTGAAAAGTCCGCACAGGTTGCCATTGAGAAGAAGCGCAAGACCGTGAAGCTTGAACACCTAAGAATCGCCGTCAAGAGGCACCAACCGACCAGTGATTTTCTCATTGATTCGCTTCCTCTGCCCTCTCAGCCGGTTAATCGCCCGGCCAAAGATCGGAGCCAATCTTGCCCAGATGCTGATAAGCCGGCTCCATTTGGTACTCGCCGTATCGATCATTTCTTCCGAAAGTCGGAAGGCGAAGCGCCAGAGACGAGAAACGAGCCATAG 423 0.5177 MADEEEGGLTRPEFPTGRVKKIMKLDKDIQRVNSEALFLVSCSTELFLRFLAEKSAQVAIEKKRKTVKLEHLRIAVKRHQPTSDFLIDSLPLPSQPVNRPAKDRSQSCPDADKPAPFGTRRIDHFFRKSEGEAPETRNEP 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0091 140 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 13 76 IPR003958 -
Glsi02g0091 140 SUPERFAMILY Histone-fold 13 93 IPR009072 GO:0046982
Glsi02g0091 140 Gene3D Histone, subunit A 1 91 IPR009072 GO:0046982
Glsi02g0091 140 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 12 97 - -
Glsi02g0091 140 MobiDBLite consensus disorder prediction 85 140 - -
Glsi02g0091 140 FunFam Nuclear factor Y, subunit C13 1 91 - -
Glsi02g0091 140 MobiDBLite consensus disorder prediction 116 140 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0091 4 133 CCAAT-HAP5 Transcription Factor Family AT5G43250 67.176 5.94e-56 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Glsi02g0091 CBFD_NFYB_HMF 2.8e-19 CL0012