Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0053 ATGAAGTTTGAAGTGGGGAAGCTTGCTGGAAGGGTTGCGATTGGACTCTATGGTGATGATGTGCCCCAAACAGTAGAGAACTTCCCTGCCCTTTGTACAGGAGAGAAGGGCTTTGGGGAACTGGAGGCAAAAGTATATATGGTCGCACATTCAAAGATGAGAATTTCAAGAGTTGTTAGCATGGCAAACGCAGGCCCCAACACCAATGGGAGTCAGCTTTTTATATGCACAGTCAAGACACCATGGCTGGATCAGAGGCATGTTGTATTTGGCCAAGTATTGGAAGGCATGGACATGATTAGGTTGATTGAGTCACAGGAGACAGATCGAGTTAAGGGAATTTTGAATGGCGTTGTTGAGTATGGGGAATTGGGTGATGATGAAACTCCAGGAATCTTCTACCAGACGTGCGACGAAATTCTATCATTATTTGGTGGTGATTAG 444 0.4527 MKFEVGKLAGRVAIGLYGDDVPQTVENFPALCTGEKGFGELEAKVYMVAHSKMRISRVVSMANAGPNTNGSQLFICTVKTPWLDQRHVVFGQVLEGMDMIRLIESQETDRVKGILNGVVEYGELGDDETPGIFYQTCDEILSLFGGD 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0053 147 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 58 110 IPR002130 GO:0000413|GO:0003755
Glsi02g0053 147 Gene3D - 2 53 IPR029000 -
Glsi02g0053 147 Gene3D - 54 126 IPR029000 -
Glsi02g0053 147 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 6 139 IPR002130 GO:0000413|GO:0003755
Glsi02g0053 147 SUPERFAMILY Cyclophilin-like 6 110 IPR029000 -
Glsi02g0053 147 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 56 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0053 Glsi-ChrGlsi02 393169 397427 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0053 10 110 U-box Gene Family AT5G67530 31.343 8.50e-09 51.2