Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0043 ATGGACAAGGAGAAGGAGAAGGAGAAGAAGGAGAAGCTCAATTTTGTTAAGAATGGGGAGCTTAGATTGCCGCCTGGATTCCGTTTCCACCCAACAGACGAAGAACTTGTGGTGCAATACTTGAAGCGCAAGGTCTTCTCCTGCCCTTTGCCTGCTTCTATCATTCCCGAGGTCCATGTTTGCAAGTCTGATCCCTGGGATTTGCCAGGTGATTTGGAGCAGGAGAGGTACTTCTTCAGCACTAGAGAAGCCAAATATTCCAATGGTAACAGATCCAACAGAGCCACCAATTCGGGGTATTGGAAGGCAACGGGGCTAGACAAACAAATTGTTAGTTCAAGGGGGCATCAGGTGGTTGGGATGAAGAAGACCCTGGTTTTCTACAGAGGGAAGCCACCCCATGGATGTAGAACTGACTGGATCATGCACGAATATCGCCTCCTTACCAACAACACTTCAGCAGCTCAGACCCCCGTGACGGCCATGGAAAATTGGGTACTGTGTCGCATATTTTTGAAGAGAAGAAGTGGAGAAAGTAGCAGCCTGAAGCTGAACAAGTGTAGGCCAGTGTTCTACGACTTCTTGGCACAGAACAGGACAGATTTAAATCGTACCCCTACTTCGTCGTCGTCGGGCGCTAGTGGAATTACCCACGTCTCCTCAGATGAACATGAAGAAAGCAGTAGTAGTTGCAATAGTTTGCCTTATTTTAGAAGAAAACCGTGA 726 0.478 MDKEKEKEKKEKLNFVKNGELRLPPGFRFHPTDEELVVQYLKRKVFSCPLPASIIPEVHVCKSDPWDLPGDLEQERYFFSTREAKYSNGNRSNRATNSGYWKATGLDKQIVSSRGHQVVGMKKTLVFYRGKPPHGCRTDWIMHEYRLLTNNTSAAQTPVTAMENWVLCRIFLKRRSGESSSLKLNKCRPVFYDFLAQNRTDLNRTPTSSSSGASGITHVSSDEHEESSSSCNSLPYFRRKP 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0043 241 MobiDBLite consensus disorder prediction 203 241 - -
Glsi02g0043 241 Pfam No apical meristem (NAM) protein 24 147 IPR003441 GO:0003677|GO:0006355
Glsi02g0043 241 SUPERFAMILY NAC domain 19 173 IPR036093 GO:0003677|GO:0006355
Glsi02g0043 241 Gene3D NAC domain 32 177 IPR036093 GO:0003677|GO:0006355
Glsi02g0043 241 ProSiteProfiles NAC domain profile. 23 173 IPR003441 GO:0003677|GO:0006355
Glsi02g0043 241 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 22 209 - -
Glsi02g0043 241 MobiDBLite consensus disorder prediction 203 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0043 Glsi-ChrGlsi02 344504 345410 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0043 11 234 NAC Transcription Factor Family AT5G13180 57.874 4.16e-98 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Glsi02g0043 NAM 1.7e-35 No_clan