Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0026 ATGCGTTCAATTTGGTGTTTCTGCTTTCTCTTCCTTTCTTTTGTACCTGCTTTAATGGTTAGGAAAAGATGTACTCCCTCTTATTATTTAAGGGAGCTGTTTACTTTCCTTTTGCTATTCCTATTTAGCTTGCACCATATCACTGTTGAGTGCGAGGGAAGGTTGACTAAGCAGATCTCTTCAGAGCCTCCATCTACGCCATCACAATACAACGATAACCTCCGGAAGATCATCATTAGCGTTGCTTTAGGAGCAGTAACTGGATTAGTTGGCTCCGTTTTCTTCGCACTCATAGTTCGTTGTTTTGTTCAGTATTTGAATCGGACCCCAATTCTAAAGGGCCCTGTCATATTTTCCCCAAAAATTGATCCTAAGACACTCCAATCAGCTTTGGCAAAAGAAAACCATCTACTTGGTTCAAGCCTAAACGGGAAATGTTACAGAACAGTGCTTGACAATGGGCTCACAATTGCAGTCAAGAGGCTAACACCCTTTGAAAGCGGTTCACCAGAGATAAGGAGAAAATCTGTAAAGAGACAGATACAAAAGGAGCTGGAACTGCTTGCCAGCCTGAGACATCGTAATTTGATGAGCTTGCGGGCCTATGTTCGTGAACCTGATAGGTATTCCCTGGTTTATGATTATTTACCCAAGGGCAGCCTCGCGGATGTAATGAACAGAGTTAAGGAGAATGAGTTGCAGCTTGGCTGGGAGGTTCGGCTTCGGATTGCTGTTGGCGTCGTTAAGGGACTTCAGTATCTTCATTATACTTGCGTACCTCAAATTCTGCACTACAACTTGAAACCCACCAATGTCATGTTGGATGCACAGTTTGAACCCAGGTTGGCAGATTATGGATTGGTTAAACTTCTACCCTACTTGGATAGAGGGACATCTGGCTACAGTCCTCCTGAATGTTTCCATAATTGCAGCAGGTACAGTGATAAAAGTGACATCTTCAGTTTTGGTATGATACTGGGTGTTTTACTGACTGGTAGGGACCCTGCGGATCCATTCTTTGGAGAAGCAGCGAGTGGGGGAAGTTTGGGATGTTGGCTTCGGCACTTGCAGCAAGCAGGTGAGGCAGGGGAAGCTCTTGATAAGAGCATTATTGGGGAAGAAGGGGAGGAAGACGATATGCTAATGGCTGTCAGAGTTGCTGCCGCATGCCTCTCTGATATGCCTGCAGACAGGCCTTCCAGTGATGAGCTTGTTCACATGCTAACGCAACTTCACAGTTTTTGA 1245 0.4498 MRSIWCFCFLFLSFVPALMVRKRCTPSYYLRELFTFLLLFLFSLHHITVECEGRLTKQISSEPPSTPSQYNDNLRKIIISVALGAVTGLVGSVFFALIVRCFVQYLNRTPILKGPVIFSPKIDPKTLQSALAKENHLLGSSLNGKCYRTVLDNGLTIAVKRLTPFESGSPEIRRKSVKRQIQKELELLASLRHRNLMSLRAYVREPDRYSLVYDYLPKGSLADVMNRVKENELQLGWEVRLRIAVGVVKGLQYLHYTCVPQILHYNLKPTNVMLDAQFEPRLADYGLVKLLPYLDRGTSGYSPPECFHNCSRYSDKSDIFSFGMILGVLLTGRDPADPFFGEAASGGSLGCWLRHLQQAGEAGEALDKSIIGEEGEEDDMLMAVRVAAACLSDMPADRPSSDELVHMLTQLHSF 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0026 414 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 45 410 - -
Glsi02g0026 414 Gene3D Phosphorylase Kinase; domain 1 118 215 - -
Glsi02g0026 414 SUPERFAMILY Protein kinase-like (PK-like) 135 408 IPR011009 -
Glsi02g0026 414 FunFam Inactive leucine-rich repeat receptor-like protein kinase CORYNE 124 215 - -
Glsi02g0026 414 Coils Coil 174 194 - -
Glsi02g0026 414 FunFam Inactive leucine-rich repeat receptor-like protein kinase CORYNE 216 413 - -
Glsi02g0026 414 Pfam Protein kinase domain 134 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g0026 414 Gene3D Transferase(Phosphotransferase) domain 1 216 413 - -
Glsi02g0026 414 CDD STKc_IRAK 138 411 - -
Glsi02g0026 414 ProSiteProfiles Protein kinase domain profile. 132 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0026 Glsi-ChrGlsi02 245217 246792 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0026 78 411 Receptor kinase-like Gene Family AT2G31880 33.803 4.03e-61 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Glsi02g0026 Pkinase 3.8e-31 CL0016