Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0022 ATGGCTTTAGAGCAGCAATTATCACTCGGTCCGAATCCCAACCCCGTTGACGGCCAAACAGACGGAACCACTAACGGCGTCGATGCTCGGCCGCCGTCCATCGACGGCGGAGAGGATGGTAGCAAAGCGCCGAGACTCCCTCGTTGGACGAGACAGGAGATTCTCGTGCTGATACATGGCAAGCGAGACGCAGAGAACCGGTTTCGAGGGGGCCGCAGTGCGGGTTTGCCATTCGGGACCGGTCAGGTGGAGCCGAAATGGGCTTCGGTGTCATCGTACTGCAAAAAGCATGGGGTGAATAGAGGACCGGTGCAGTGCCGGAAAAGATGGAGCAATTTGGCTGGAGACTACAAAAAGATCAAAGAATGGGAGTCTCAGATAAGGGACGATGCGGAATCGTTTTGGCTCATGAGAAACGATTTAAGGAGAGAGAGGAAATTGCCGGGCTTTTTCGACAAGGAGGTCTATGATATTCTGGATTCGGGGTCGCAGGCGCCGGCTTTAGCTTTAGGTCTAGCACCGGCTCCAGCAACAGGAACGGGGTCGGTCGAAAAGGGGAAGGACAGTAGGGGAGTGGCGACGGAGGAAGCCGAGGCTGATACAGAGCCACACTTGTACGATAGTAATCGGAGCGCAGCTGGGGAGGATGGCCTATTCTCAGATTTCGAACAAGAAGAGGTAGGTGTGAGTCAGGAGAAGGAGGCAGCGAGGAAGGATGTCTTGCCGCAGACGACGGCTGTCCCTGCACCTCTTCCAATCTCAGAGAAGCAATATCAACCACTTCTCCGTGACTGTCAAGGTCAAGGAAATGCTCAAGGTGTGAACAATGAGAAACAGCCAGGCTCAAATCCAGAAATGGGTTCTACGTCTCAAGGAGGACGGAAGAGGAAGCGATTGGCTATAGATGGGGAGGAGGAAAATTTGCAATATCAATTAATGGACGTGTTGGAAAGAAATGGGAAGATGCTAACCGCCCAGCTTGAAGCTCAGAATATAAATTTCCAGTTAGATCGGGAGCAGCGGAAAGACCACGCAAGTAACTTGGTTGCTGTTCTTGATAAGCTTGCAGATGCTTTAGGCAGAATTGCTGATAAATTGTAG 1101 0.5204 MALEQQLSLGPNPNPVDGQTDGTTNGVDARPPSIDGGEDGSKAPRLPRWTRQEILVLIHGKRDAENRFRGGRSAGLPFGTGQVEPKWASVSSYCKKHGVNRGPVQCRKRWSNLAGDYKKIKEWESQIRDDAESFWLMRNDLRRERKLPGFFDKEVYDILDSGSQAPALALGLAPAPATGTGSVEKGKDSRGVATEEAEADTEPHLYDSNRSAAGEDGLFSDFEQEEVGVSQEKEAARKDVLPQTTAVPAPLPISEKQYQPLLRDCQGQGNAQGVNNEKQPGSNPEMGSTSQGGRKRKRLAIDGEEENLQYQLMDVLERNGKMLTAQLEAQNINFQLDREQRKDHASNLVAVLDKLADALGRIADKL 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0022 366 ProSiteProfiles Myb-like domain profile. 48 114 IPR001005 -
Glsi02g0022 366 MobiDBLite consensus disorder prediction 1 47 - -
Glsi02g0022 366 MobiDBLite consensus disorder prediction 1 27 - -
Glsi02g0022 366 CDD GT1 47 121 - -
Glsi02g0022 366 MobiDBLite consensus disorder prediction 174 216 - -
Glsi02g0022 366 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 20 366 - -
Glsi02g0022 366 MobiDBLite consensus disorder prediction 188 205 - -
Glsi02g0022 366 MobiDBLite consensus disorder prediction 265 296 - -
Glsi02g0022 366 Gene3D - 49 119 - -
Glsi02g0022 366 Pfam Myb/SANT-like DNA-binding domain 48 137 IPR044822 -
Glsi02g0022 366 MobiDBLite consensus disorder prediction 265 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0022 Glsi-ChrGlsi02 220754 223063 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0022 48 141 Trihelix Transcription Factor Family AT1G33240 31.579 1.13e-07 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Glsi02g0022 Myb_DNA-bind_4 6.6e-12 CL0123