Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g2375 ATGGGATTCCCGACGAATCATGTCAAATTTGGGCTTCTTATCACTTATCATTGTCAACAAGTAAAAGAGAAGGAAAAAGAGGAACTTGAGATTTCAACTGCATATGAATCTGCTGCATCAATGACAAGAAACACTCCATTAGCTCCCATGAATATCAAAGATCTCCGTCTAAGTGCCGGCTATAGGGATGTTGATATATTTGTGTATGAGGAGCTGAGGCTGGCCACCAAGCACTTTCGTCCAGATTTAATCCTGGGAGAGGGTGGTTTTGGAGTAGTGTATAAAGGATTGATAGATGAAAATGTGAGGCCAGGTTACAAGACCACCCAAGTTGCCATTAAGGAGCTAAATCGAGAAGGATTTCAAGGTGATAGGGAATGGCTGGCTGAAGTTAACTATTTAGGTCAATTCAGTCACCCAAATCTTGTGAAGCTTATTGGATACTGCTGTGAGGATGAATACAGGTTATTGGTCTATGAATACATGGCAAGTGGGAGCTTGGAAAAACATCTTTTTCGCAGAGTGGGCTCAACACTTACTTGGTCAAAAAGAATGAAGATTGCTTTACATGCTGCAAAAGGGCTTGCTTTTCTTCATGGTGCAGAAAGGCCCATCAAATATCGTGACTTTAAGACATCAAATGTTTTGCTAGATGTGGATTTCAATGCAAAGCTTTCGGACTTCGGTCTTGCAAAGGATGGGCCTATGGGGGATCAAACCCATGTTTCAACAAGAGTGATGGGCACATATGGATATGCTGCTCCAGAGTATGTGATGACTGGGCATTTAACAGCTTGA 798 0.4198 MGFPTNHVKFGLLITYHCQQVKEKEKEELEISTAYESAASMTRNTPLAPMNIKDLRLSAGYRDVDIFVYEELRLATKHFRPDLILGEGGFGVVYKGLIDENVRPGYKTTQVAIKELNREGFQGDREWLAEVNYLGQFSHPNLVKLIGYCCEDEYRLLVYEYMASGSLEKHLFRRVGSTLTWSKRMKIALHAAKGLAFLHGAERPIKYRDFKTSNVLLDVDFNAKLSDFGLAKDGPMGDQTHVSTRVMGTYGYAAPEYVMTGHLTA 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g2375 265 ProSitePatterns Protein kinases ATP-binding region signature. 85 114 IPR017441 GO:0005524
Glsi01g2375 265 PANTHER OS01G0588500 PROTEIN-RELATED 41 265 - -
Glsi01g2375 265 FunFam Serine/threonine-protein kinase BIK1 48 161 - -
Glsi01g2375 265 SUPERFAMILY Protein kinase-like (PK-like) 64 264 IPR011009 -
Glsi01g2375 265 Gene3D Phosphorylase Kinase; domain 1 55 161 - -
Glsi01g2375 265 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Glsi01g2375 265 Gene3D Transferase(Phosphotransferase) domain 1 162 265 - -
Glsi01g2375 265 ProSiteProfiles Protein kinase domain profile. 79 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi01g2375 265 Pfam Protein tyrosine and serine/threonine kinase 84 264 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g2375 Glsi-ChrGlsi01 86422817 86428351 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g2375 16 264 Glycoside Hydrolase AT3G07070 45.833 2.96e-67 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Glsi01g2375 PK_Tyr_Ser-Thr 1e-33 CL0016