Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g2373 ATGGCACTCAATAGTGGTACAACTTGGTCTCCAGTCATATTCATCCTTCTATTATATGCCGTTGCCTCTCTTGGGTCTTCAGAGTCAGAATTGCTCCTCAGATTCAAGGAATCCCTGCAAAACAACAATGCATTGTCCACTTGGAATTCGTCAACCTTTCCATGTTCGGGTGACCGTCCTAATTGGGTTGGTGTTCTCTGCACAGAAGGAAAAATTTGGGGCTTGAAACTTGAGAATATGGGGCTGAAGGGGGTAATTGATGTGGACTCGCTCAAACAGTTGCCAAATCTCAGAACCCTAAGTTTCATGAACAACGATTTTGATAGCACATGGCCAGAAATAAACAAGCTGGCTTCTCTCAAGTCAGTATATCTTTCAAATAATAAGTTTTCAGGAGATATTCCTACTCAAACTTTTCAGGGTACGCAGTGGTTGAAAAAAATTCATTTGTCAAACAATCAGTTTACGGGTGATATTCCAACTTCGTTAACATTTTTACCAAGGCTTATGGAGTTGAGGTTGGAGGGGAACAAATTCGATGGTCACATTCCCAATTTTCTGCAGACCTTGAAATCTTTTAGCGTAGCTAACAATCAGTTGCATGGTGAAATACCAGCCAGCCTCAGTAAGATGCCGACCTCATCCTTTTCTGGCAATGAGGGCTTATGTGGAACCCCGTTGGGTGCATGCCATTCCTCAAAAAATCCCTCAATTATCAGTATCGTTGTAATTGCCATAGTCGTTGGTGTGGCAGTGATTGTCATTGGAGTAATAATCTTTGTCCTTCATCGACGAAAAGGTCGACCAACAGAGTCCGTGGAGAATCCACAATCAAACCTCCAAAAGAAAGCATGTTTCCAGGAAGAAGATGAAGGCAGCAATCACTCAACAGCATCGAAAGTCTCAAACCACAGCAAAAAAGGAGAGAACATGAAGTTATCCTTTCTAAGGAACGACAGAGAGAGGTTTGATCTGCAAGACTTACTAAGAGCCTCAGCTGAAATATTGGGCAGTGGTTGCTTTAGTTCTTCCTACAAGGCTGTTTTGTTGAATGGCCCAATGATGGTGGTGAAGAGGTTTAAGCAAATGAACAATGTAGGAAAGGAAGAATTCCAGGAGCACATGAGGAGGATAGGAAGGTTGGCGCATCCTAATTTGCTTCCTCTAGTGGCTTACTATTATAGAAAGGAGGAGAAACTCTTGGTTACAGACTATATTCAAAATGGCAGCTTGGCTGTTCGCCTTCATGGCCAGCCAAGCCTTGATTGGCCAACCCGATTGAAGATTGTCAAAGGCATCACCAAAGGTCTTGAATATCTCTATAAGGAGATGCCAAGCTTAATTGCACCCCATGGAGATCTTAAATCCTCAAACGTTCTTCTTAGTCAAACTTTTGAACCCCTTTTGAATGACTATGGCTTAGTCCCAGTAATTAATCAAGAGCTTGCTCAGGACATCTTGGTGATCTACAAGTCCCCTGAGTATTTACAACATGGTCGGATTACAAAGAAGACTGAGGTATGGAGTCTTGGGATAATGATTTTGGAGATTTTAACTGCCAAGTTCCCTGCTAACTTGCTACAAGGTAAAGGTAGTGAGGTGGATTTGGCAAATTGGGTCAATTCAGTTGTTCAAGAAGAGTGGACTAGCAAGGTATTTGATAAAGAAATGGGGGCAACCAAGAATAGCGAGGGGGAGATGGTGAAGCTTTTGAAGATTGCTTTGCGTTGTTGTGAAGGGGATATGGACAAGAGATGGGATTTGAAAGAAGCTAATGAGAAAATTCAAGAGGTGAAGGAGAGGGATCATGATGAGGATTTCTATTCTTCGTATGCTAGCGAAGCAGACATGAAGTCTCCAAGGGGATTGTCAGATGAAATCAATCTCTCCATAAATGGTTGA 1902 0.4232 MALNSGTTWSPVIFILLLYAVASLGSSESELLLRFKESLQNNNALSTWNSSTFPCSGDRPNWVGVLCTEGKIWGLKLENMGLKGVIDVDSLKQLPNLRTLSFMNNDFDSTWPEINKLASLKSVYLSNNKFSGDIPTQTFQGTQWLKKIHLSNNQFTGDIPTSLTFLPRLMELRLEGNKFDGHIPNFLQTLKSFSVANNQLHGEIPASLSKMPTSSFSGNEGLCGTPLGACHSSKNPSIISIVVIAIVVGVAVIVIGVIIFVLHRRKGRPTESVENPQSNLQKKACFQEEDEGSNHSTASKVSNHSKKGENMKLSFLRNDRERFDLQDLLRASAEILGSGCFSSSYKAVLLNGPMMVVKRFKQMNNVGKEEFQEHMRRIGRLAHPNLLPLVAYYYRKEEKLLVTDYIQNGSLAVRLHGQPSLDWPTRLKIVKGITKGLEYLYKEMPSLIAPHGDLKSSNVLLSQTFEPLLNDYGLVPVINQELAQDILVIYKSPEYLQHGRITKKTEVWSLGIMILEILTAKFPANLLQGKGSEVDLANWVNSVVQEEWTSKVFDKEMGATKNSEGEMVKLLKIALRCCEGDMDKRWDLKEANEKIQEVKERDHDEDFYSSYASEADMKSPRGLSDEINLSING 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g2373 633 SUPERFAMILY Protein kinase-like (PK-like) 334 595 IPR011009 -
Glsi01g2373 633 ProSiteProfiles Protein kinase domain profile. 330 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi01g2373 633 SUPERFAMILY L domain-like 52 212 - -
Glsi01g2373 633 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 88 183 - -
Glsi01g2373 633 Pfam Leucine rich repeat 119 179 IPR001611 GO:0005515
Glsi01g2373 633 SMART serkin_6 330 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi01g2373 633 Gene3D Phosphorylase Kinase; domain 1 294 405 - -
Glsi01g2373 633 Pfam Protein kinase domain 333 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi01g2373 633 Gene3D Transferase(Phosphotransferase) domain 1 406 617 - -
Glsi01g2373 633 Gene3D Ribonuclease Inhibitor 26 185 IPR032675 -
Glsi01g2373 633 FunFam pollen receptor-like kinase 1 298 405 - -
Glsi01g2373 633 MobiDBLite consensus disorder prediction 285 306 - -
Glsi01g2373 633 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 14 602 IPR046959 -
Glsi01g2373 633 MobiDBLite consensus disorder prediction 611 633 - -
Glsi01g2373 633 Pfam Leucine rich repeat N-terminal domain 27 67 IPR013210 -
Glsi01g2373 633 Gene3D Ribonuclease Inhibitor 187 230 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g2373 Glsi-ChrGlsi01 86418258 86420575 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g2373 11 626 Receptor kinase-like Gene Family AT5G35390 54.321 0.0 685
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Glsi01g2373 Pkinase 1.2e-30 CL0016