Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g2351 ATGGCCAGAAAGTGTTCACATTGTGGAAAAATAGGCCATAATTCTAGGACCTGCACGTATTTCAGAGCCACTTCTGTAGGACTTCGTCTCTTCGGTGTTCAACTAGATGTATCCTCATCTTGTGTTGCCATGAAAAAAAGCTTCAGCATGGATTCCTTGCCTTCATCATCGTCTCAATCTTCCTCGTTTTCTTCATCAAGGATAGCCATTGATGAAAATTCTGACAGAAACTCTGTTGGGTATCTATCAGATGGTCTCATAGATGGAGCACAAGACAGGAGAAAAGGAGTTCCATGGACAGAAGAGGAGCACCGTACGTTCCTGATTGGACTTGAGAAGCTTGGAAAAGGTGATTGGAGGGGTATCTCCAGAAACTATGTGACTACAAGAACCCCAACTCAAGTTGCTAGCCATGCTCAAAAGTACTTTCTTCGACTGGCAACCATTAATAAGAAGAAGAGACGTTCAAGTCTCTTTGACATGGTTGGTAGCAGCAACCTCAACACAGCAGGTCATCCTGAAGTTGAGAATGATACTACTTTGTCACTGATAGGCCTTACCTCCTCCTCCTCAGCTGAAGGTGTGGGCATGTGGGTACATTCCCAGATGAAATCTTCAAATACAGTGCCTGATCTGGAGCTCACTCTTGCGGCCCCCAAATCATCCCCTCCTCCCTTTCTTCTTGGCCCAATTAGTGTTACATAA 705 0.4482 MARKCSHCGKIGHNSRTCTYFRATSVGLRLFGVQLDVSSSCVAMKKSFSMDSLPSSSSQSSSFSSSRIAIDENSDRNSVGYLSDGLIDGAQDRRKGVPWTEEEHRTFLIGLEKLGKGDWRGISRNYVTTRTPTQVASHAQKYFLRLATINKKKRRSSLFDMVGSSNLNTAGHPEVENDTTLSLIGLTSSSSAEGVGMWVHSQMKSSNTVPDLELTLAAPKSSPPPFLLGPISVT 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g2351 234 PANTHER TRANSCRIPTION FACTOR KUA1 3 187 - -
Glsi01g2351 234 NCBIfam myb-like DNA-binding domain, SHAQKYF class 95 145 IPR006447 GO:0003677
Glsi01g2351 234 ProSiteProfiles Myb-like domain profile. 91 143 IPR001005 -
Glsi01g2351 234 FunFam transcription factor MYB1R1 97 148 - -
Glsi01g2351 234 ProSiteProfiles SANT domain profile. 99 147 IPR017884 -
Glsi01g2351 234 Gene3D - 97 150 - -
Glsi01g2351 234 CDD SANT 98 143 IPR001005 -
Glsi01g2351 234 SUPERFAMILY Homeodomain-like 93 147 IPR009057 -
Glsi01g2351 234 Pfam Myb-like DNA-binding domain 98 143 IPR001005 -
Glsi01g2351 234 SMART sant 95 145 IPR001005 -
Glsi01g2351 234 ProSiteProfiles Zinc finger CCHC-type profile. 3 18 IPR001878 GO:0003676|GO:0008270
Glsi01g2351 234 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 91 147 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g2351 Glsi-ChrGlsi01 86188713 86189583 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Glsi01g2351 Myb_DNA-binding 7.6e-11 CL0123