Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g2345 ATGGGTCGCCGAAAGGATAACAACCATAGCTCAAGTGGCTGCAACAACAGTAAAATGCACGAGCACATTCGCTTCGAAGACTCAGATGAAGTTATAGAGGATGCTGCTGAGAGCTCAAACCTCGACCAGTCCGTGTGCGAGCCCGAAATAGCCTTTATTGATTCAGATGATAAAACAAGCGCCGACTATTACTTCGATTCCTACTCTCACTTTGGAATTCACGAAGAAATGTTGAAGGACACCATAAGAACAAAGACATATCAAAATGTTATTTATCAGAATGCATTCTTAATCAAGAATAAAGTAGTTCTTGATGTGGGTGCTGGGACTGGAATTTTATCATTATTTTGTGCCAAAGCAGGGGCAGAACATGTCTATGCAGTTGAGTGCTCCGATATGGCTGACATGGCAAAGGAGATAGTTGAAGCTAACGGGTACTCCAATGTTATAACAGTTTTAAAGGGGAAGATTGAAGAAATTGAACTTCCAGTTGCTAAAGTTGATATAATCATTTCAGAATGGATGGGATATTTCTTGCTGTTCGAGAATATGTTAAATACTGTCCTCTATGCACGTGACAAATGGCTTGTGGGTGACGGAGTTGTGCTACCTGATAAAACTTCCCTCTATCTTACGGCCATTGAAGATGCAGATTACAAAGAAGATAAAATAGAGTTTTGGAACAACGTATATGGATTTGACATGAGCTGCATCAAGAAGCAAGCAATTATGGAACCTCTTGTTGACACAGTTGACCAGAATCAGATTGTTACAAATTGCCAGCTACTGAAGACGATGGATATCTCTAAGATGGCACCTGGAGATGCTTCCTTCACAGCACCTTTTAAGCTTGTGGCTGAACGCGATGATTATATTCATGCTCTTGTTGCATATTTTGATGTATCATTTACAAAGTGTCATAAACTGATGGGCTTCTCTACAGGGCCAAGATCACGGGCTACGCATTGGAAACAAACAGTCCTTTACCTGGAAGATGTCTTGACCATATGTGAGGGGGAGGCAATTGTTGGGAGCATGACTGTGGCTCCAAATAAAAGGAACCCTCGGGATGTTGACATAATGCTCAACTATTCATTAAATGGTCGACGATCCACAGTTTCAAGGGTTCAATATTACAAGATGCGCTGA 1149 0.4125 MGRRKDNNHSSSGCNNSKMHEHIRFEDSDEVIEDAAESSNLDQSVCEPEIAFIDSDDKTSADYYFDSYSHFGIHEEMLKDTIRTKTYQNVIYQNAFLIKNKVVLDVGAGTGILSLFCAKAGAEHVYAVECSDMADMAKEIVEANGYSNVITVLKGKIEEIELPVAKVDIIISEWMGYFLLFENMLNTVLYARDKWLVGDGVVLPDKTSLYLTAIEDADYKEDKIEFWNNVYGFDMSCIKKQAIMEPLVDTVDQNQIVTNCQLLKTMDISKMAPGDASFTAPFKLVAERDDYIHALVAYFDVSFTKCHKLMGFSTGPRSRATHWKQTVLYLEDVLTICEGEAIVGSMTVAPNKRNPRDVDIMLNYSLNGRRSTVSRVQYYKMR 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g2345 382 MobiDBLite consensus disorder prediction 1 20 - -
Glsi01g2345 382 FunFam probable protein arginine N-methyltransferase 1 52 204 - -
Glsi01g2345 382 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 67 381 IPR029063 -
Glsi01g2345 382 CDD AdoMet_MTases 103 203 - -
Glsi01g2345 382 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 25 369 IPR025799 GO:0016274|GO:0018216
Glsi01g2345 382 FunFam Blast:Protein arginine N-methyltransferase 1 206 382 - -
Glsi01g2345 382 Gene3D Vaccinia Virus protein VP39 52 204 IPR029063 -
Glsi01g2345 382 Pfam Ribosomal protein L11 methyltransferase (PrmA) 98 173 - -
Glsi01g2345 382 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 61 361 IPR025799 GO:0016274|GO:0018216
Glsi01g2345 382 Gene3D - 206 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g2345 Glsi-ChrGlsi01 86115879 86120028 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g2345 64 345 C2H2 Transcription Factor Family AT3G12270 39.145 1.85e-65 217