Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g2335 ATGGTGGAGAAGACGAAGGTTAGGAAGGAGGAGGTGGTTACCCGAGAGTACACCATCAACCTCCACAAGCGATTGCATGGCTGCACTTTTAAGAAGAAAGCACCTAAAGCAATAAAGGAGATAAGGAAGTTTGCCCAGAAAGCCATGGGTACAAATGATGTGAGAGTGGATGTGAAGCTGAACAAGTATGTCTGGAGCCAGGGGATCCGAAGTGTCCCAAGGAGGATTAGAGTACGCATTGCTCGCAAGAGAAATGATGATGAAGATGCAAAGGAAGAGCTATACTCCCTTGTTACAGTTGTTGAAATCCCTAAAGAAGAGCTCAAAGGTTTGGCCACTAAGGTTATTGAAGATGAGGATTGA 363 0.4518 MVEKTKVRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTNDVRVDVKLNKYVWSQGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVVEIPKEELKGLATKVIEDED 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g2335 120 PANTHER 60S RIBOSOMAL PROTEIN L31 2 119 IPR000054 GO:0003735|GO:0005840|GO:0006412
Glsi01g2335 120 FunFam 60S ribosomal protein L31 6 119 - -
Glsi01g2335 120 SUPERFAMILY Ribosomal protein L31e 11 92 IPR023621 -
Glsi01g2335 120 ProSitePatterns Ribosomal protein L31e signature. 54 68 IPR020052 GO:0003735|GO:0005840|GO:0006412
Glsi01g2335 120 Pfam Ribosomal protein L31e 11 92 IPR000054 GO:0003735|GO:0005840|GO:0006412
Glsi01g2335 120 CDD Ribosomal_L31e 9 92 IPR000054 GO:0003735|GO:0005840|GO:0006412
Glsi01g2335 120 SMART Ribosomal_L31e_2 10 93 IPR000054 GO:0003735|GO:0005840|GO:0006412
Glsi01g2335 120 Gene3D - 8 120 IPR023621 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g2335 Glsi-ChrGlsi01 86056102 86057654 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g2335 2 120 Cytoplasmic Ribosomal Protein Gene Family AT2G19740 80.672 1.06e-66 195