Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g2334 ATGGGTAAGGTGCACGGATCTCTGGCTCGTGCTGGTAAGGTGAGAGGCCAAACTCCTAAAGTGGCCAAACAAGACAAGAAGAAGAAGCCTCGCGGCCGTGCTCACAAGCGGATGCAATACAATCGCCGATTCGTGACCGCCGTTGTGGGTTTCGGGAAGAAAAGAGGACCCAACTCGTCTGAGAACCCACAAACCGATCATTTGGGCGCCACGTGGAGAGGTCACTTCCTGCTTGTCGACGTCAACAAGAAGGAAAGAGCTTTCCCTTTAAATCACCAACGCGTCCAAGCAGACTTCACCAAGGGTATCCGAATTTCAATATCTCATAATTCAACCATGTTTACCCGGATTTTTGGCAAACCAAAACAGGAGACCAATGCTTTAACGACTTTGGACAAGTTAAACGAGACACTTGAAATGCTAGAGAAAAAGGAGAAAGTCCTTGTTAAAAAGGCTGCAGCAGAGGTTGAAAAGGCCAAAGAATATACTAGGGCAAAGAACAAAAGGGCGGCAATACAATGTTTAAAGAGGAAGAGGCTATATGAACAGCAAATAGAGCAGCTTGGAAATTTCCAGTTGCGTATCCATGACCAGATGATAATGTTGGAAGGTGCTAAGGCCACCACGGAAACTGTAGATGCATTGCGAACTGGAGCATCTACCATGAAGGCTATGCAAAAAGCAACGAATATTGATGATGTTGACAAGACCATGGATGAGATTAATGAACAAACGGAGAACATGAAACAAATCCAAGAAGCATTGTCAGCTCCAATCGGTGCATCTGCTGATTTTGATGAGGATGAATTGGAAGCAGAACTTGAAGAGCTGGAGGGTGCTGAGTTGGAAGAACAGCTGCTTCAGCCTGCAACTACAGCTCCTGCAGCCCCAGTGCAGGTCCCAGCTGGGCGGCAGCCTGCCCGCCCTGCTCCTCAGAAGCACAGTGCCGATGAAGATGAACTGGCTGCTTTGCAGGCTGAGATGGCACTTTAA 993 0.4773 MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSENPQTDHLGATWRGHFLLVDVNKKERAFPLNHQRVQADFTKGIRISISHNSTMFTRIFGKPKQETNALTTLDKLNETLEMLEKKEKVLVKKAAAEVEKAKEYTRAKNKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASTMKAMQKATNIDDVDKTMDEINEQTENMKQIQEALSAPIGASADFDEDELEAELEELEGAELEEQLLQPATTAPAAPVQVPAGRQPARPAPQKHSADEDELAALQAEMAL 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g2334 330 MobiDBLite consensus disorder prediction 1 36 - -
Glsi01g2334 330 Pfam Ribosomal protein S30 3 59 IPR006846 GO:0003735|GO:0005840|GO:0006412
Glsi01g2334 330 Coils Coil 124 151 - -
Glsi01g2334 330 Coils Coil 234 254 - -
Glsi01g2334 330 Gene3D - 229 283 - -
Glsi01g2334 330 Pfam Snf7 132 298 IPR005024 GO:0007034
Glsi01g2334 330 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 106 299 IPR005024 GO:0007034
Glsi01g2334 330 Coils Coil 263 287 - -
Glsi01g2334 330 MobiDBLite consensus disorder prediction 286 330 - -
Glsi01g2334 330 MobiDBLite consensus disorder prediction 22 36 - -
Glsi01g2334 330 Gene3D - 126 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g2334 Glsi-ChrGlsi01 86046468 86054227 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g2334 1 61 Cytoplasmic Ribosomal Protein Gene Family AT5G56670 96.721 2.81e-28 102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi01g2334 01 86046468 86054227 Glsi01g2334 01 86046468 86054227 ECH