Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g2325 ATGATTATACTCAAGGAGCATCTGCACATTCCTGATTATTTTTGGTACATAATTCATTGGCCCGAGATGGATAGAGCATCCCTCACACGTCAAAAGCAGACCATGAATAAGATCAGCAATTTAAGCTCTGTGAGCAGCTCTGATCTCATAGATGCCAAGCTCGAAGAGCATCAGTTGTGTGGATCCAAGCAGTGCCCCGGTTGCGGACACAAGTTTGAAGCCAAGCCGGACTGGCTGGGTCTACCAGCAGGAGTGAAGTTTGATCCAACAGACCAGGAACTAATAGAACATCTTGAAGCCAAAGTAGAGGCAAAGAATATGAAATCGCACCCTTTGATAGATGAGTTCATTCCTACTATTGAAGGAGAAGATGGGATTTGTTATACTCATCCTGAGAAACTTCCAGGAGTAACAAGAGATGGTTTGAGCAGGCACTTCTTTCACAGACCTTCGAAGGCTTATACAACTGGGACAAGAAAGAGAAGAAAAATTCAAAACGAATGCGACTTGCAAGGAGGAGAAACCCGATGGCATAAGACTGGCAAAACCAGGCCAGTTATGGTGAATGGTAAGCAAAAGGGGTGCAAGAAAATCCTAGTGCTCTACACAAACTTCGGGAAGAACAGAAAACCCGAGAAGACCAACTGGGTGATGCACCAATACCATCTAGGTCAGCATGAAGAGGAGAAAGAAGGAGAGCTCGTGGTGTCAAAGATATTCTATCAGACACAGCCAAGGCAATGCAATTGGTCCGATAGAAGTGGAACAACTGGCGAAGGAAGTGGGGAGCCTAATAGCAGAAGAGACAGTGGAAGTGGGAGTTGTTCTTCTAAAGAAATAGTTACTCCAATCGCAACCTACAATGCCTTGGATATTCATCACCTAAAATCGGACCATTTCAGTTTCATCCCCTTCAGAAAAAGCTTCGATGAGGTGGGAATAGGAGATGGTTCCACGAGAAGAGATCAAGTGCAAGCATCAGGGTCATGCGAAGAAGTACAGCAAGGGCAGCAACACCAACTTGCAAGTACAGCCTTCCATATGAGTAGGCCTTCACATCCCATCTCAACCATGATCTCCCCACCTCCTCCACACCACGCATCCATCATCCTCGACGATAACTCCTACCACGTCTCTCGATTAATGCTACAAAATCAACATTTCCAGCAACAACATCATAAACTAGGAGGAAGGTCTGCGTCTGGTTTGGAGGAACTCATTATGGGGTGCACTTCAATTGATAATAAATTTAAAGAGGAATCATCTATCACAAATCCACAAGAAGCAGAATGGTTGAAGTACTCTTCTTACTGGCCTGATCCTGACAACCCGGGTCATCATGGGTAG 1347 0.4506 MIILKEHLHIPDYFWYIIHWPEMDRASLTRQKQTMNKISNLSSVSSSDLIDAKLEEHQLCGSKQCPGCGHKFEAKPDWLGLPAGVKFDPTDQELIEHLEAKVEAKNMKSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQNECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQCNWSDRSGTTGEGSGEPNSRRDSGSGSCSSKEIVTPIATYNALDIHHLKSDHFSFIPFRKSFDEVGIGDGSTRRDQVQASGSCEEVQQGQQHQLASTAFHMSRPSHPISTMISPPPPHHASIILDDNSYHVSRLMLQNQHFQQQHHKLGGRSASGLEELIMGCTSIDNKFKEESSITNPQEAEWLKYSSYWPDPDNPGHHG 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g2325 448 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 42 394 IPR044799 GO:0003700
Glsi01g2325 448 ProSiteProfiles NAC domain profile. 81 242 IPR003441 GO:0003677|GO:0006355
Glsi01g2325 448 FunFam NAC domain-containing protein 73 90 246 - -
Glsi01g2325 448 Pfam No apical meristem (NAM) protein 82 223 IPR003441 GO:0003677|GO:0006355
Glsi01g2325 448 MobiDBLite consensus disorder prediction 248 277 - -
Glsi01g2325 448 SUPERFAMILY NAC domain 75 242 IPR036093 GO:0003677|GO:0006355
Glsi01g2325 448 Gene3D NAC domain 90 246 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g2325 Glsi-ChrGlsi01 85980632 85987633 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g2325 45 438 NAC Transcription Factor Family AT5G56620 55.427 3.93e-139 403
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Glsi01g2325 NAM 2.9e-24 No_clan