Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g2324 ATGCTCGTAGGGCATCTTGATTTGAATTCCTCTGTTCTTGCTTTTGACTATTCAGCTCCAAATTTATTCCGGCGTTCCAAGTTCAATAATCCGATTCTCAAGTATCTACTCTGTGCGACACTCCCCACTCTATCACTCTCCGTTCCCAAACGCAACTCCATAATTGATTCGCTTACCGATTTGGCTCTCCACTTGTCTCGGTTCTTCGATCGAATTCGCTTCTCGCCGATCTTTCTGATTTTCAACCCCGTGGTAAGCTATTTTCTTCGCCGGTTTTTTAATTCGCTGTGTGGGATGAAGATCGAGGAATTGGACGACGTGGATTCCTGTCTGGGCGAAGGGAATTACGAGAAGCAGATTGCGAGGGTTGACACAAAGAGAGCGTTAGTTGGGGCAGGTGCCCGGATCCTGTTTTACCCGACACTTTTGTATAATGTGCTTCGAAACAAGATTGAAGCTGAGTTCAGGTGGTGGGACGAAGTCGACGAGTTTTTATTATTGGGTGCTGTTCCATTTCCCAAAGACGTTCCACGCTTGAAGAAGCTTGGTGTGGGTGGTGTAATTACTCTGAATGAACCCTACGAAACTTTGGTACCATCATCATTATATCTTGCTCATGGGATTGATCATTTAGTAATTCCTACAAGGGATTATCTCTTTGCCCCTTCGTTTGTAGATATAAGCCGGGCTGTGCAATTCATTCATCAGAATGCAACTTGTGGTAAAACTACTTATGTTCATTGTAAAGCTGGGCGGGGAAGGAGCACAACAATTGTGCTTTGCTATTTGGTTGAATACAAGCATATGACACCTCTGGCTGCCCTGGAATATGTACGGTCTAGAAGACCTAGAGTACTACTAGCACCATCACAGTGGAAGGCAGTTCAAAACTATAGCAAGTATCGACCTTGTCCTATATCTCGATCTCCCTCTGGGGATGCAGTTCTTATAACCAAAGCTGATCTTGAGGGTTACCATAGCACATGTGATTCTGGTATGGAGCTGGCCATTGTTCACAAAGTGCCAAAGACGAAGCCCATGATAGCAAGACTATCTTGCCTGTTTGCATCATTAAAAGTTTCTGGTAGTATTGTAGCAGTAACCCGGCGGCTGCCTGTTTCTGAGGCACGTGCTTGCTAA 1140 0.45 MLVGHLDLNSSVLAFDYSAPNLFRRSKFNNPILKYLLCATLPTLSLSVPKRNSIIDSLTDLALHLSRFFDRIRFSPIFLIFNPVVSYFLRRFFNSLCGMKIEELDDVDSCLGEGNYEKQIARVDTKRALVGAGARILFYPTLLYNVLRNKIEAEFRWWDEVDEFLLLGAVPFPKDVPRLKKLGVGGVITLNEPYETLVPSSLYLAHGIDHLVIPTRDYLFAPSFVDISRAVQFIHQNATCGKTTYVHCKAGRGRSTTIVLCYLVEYKHMTPLAALEYVRSRRPRVLLAPSQWKAVQNYSKYRPCPISRSPSGDAVLITKADLEGYHSTCDSGMELAIVHKVPKTKPMIARLSCLFASLKVSGSIVAVTRRLPVSEARAC 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g2324 379 PANTHER PHOSPHATIDYLINOSITOL PHOSPHATASE 99 357 - -
Glsi01g2324 379 ProSiteProfiles Dual specificity protein phosphatase domain profile. 157 304 IPR020422 GO:0006470|GO:0008138
Glsi01g2324 379 SMART dsp_5 160 301 IPR020422 GO:0006470|GO:0008138
Glsi01g2324 379 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 225 293 IPR000387 GO:0016311|GO:0016791
Glsi01g2324 379 ProSitePatterns Tyrosine specific protein phosphatases active site. 246 256 IPR016130 GO:0016311|GO:0016791
Glsi01g2324 379 CDD PTPMT1 157 300 IPR044596 GO:0004721
Glsi01g2324 379 Gene3D Protein tyrosine phosphatase superfamily 157 302 IPR029021 -
Glsi01g2324 379 Pfam Dual specificity phosphatase, catalytic domain 201 299 IPR000340 GO:0008138|GO:0016311
Glsi01g2324 379 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 151 300 IPR029021 -
Glsi01g2324 379 FunFam Dual specificity phosphatase domain protein 157 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g2324 Glsi-ChrGlsi01 85974175 85976807 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g2324 99 359 Protein tyrosine phosphatase (PTP) family AT2G35680 51.899 3.45e-98 293