Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g2323 ATGGAGAAGAGCAGGATTCTGGCTTTAATCCTCCTCCTACTCCATTTAACTGCAGCAAAAGCTGCCTTTGGTGTCGGCGCTGGAGTTGGTGTTGGGGGGAGCGGCGGAGTGGTTTGGGTTGGTGGCGGGACAAACACCCCAGAACCCCCTGGATCTTCAGTGCCGAAGCTGGACAGAGCTTACACAACTCTTCAGGCGTGGAAATCAGCAATTACCGAAGACCCATTAAGGATTTTAGATACTTGGGTTGGTTCTAATGTTTGTTCTTATAAAGGAGTCTTCTGTGCAAATCCTGAGGATGAAATGGCTGCATCAGGTGGCCCTGTTGTTGCAGGAATAGATCTCAACCATGCAAATCTCCAAGGAACTCTTGTCAAAGAGCTCTCTTTACTCACTGATATCTCTCTTCTCCACCTCAACAGCAATAGATTTACAGGTACTGTTCCTGCTACACTCAAAGACCTTGCGTCTTTGGAAGAGTTAGACCTCAGCAACAACCAACTTTCAGGTCCTTTCCCCACAGTTACTTTATACATGCCCAGTCTGGTTTACTTGGACCTCAGGTTCAACTCCTTCTCAGGACCGCTCCCTGAAGAACTTTTCAATAAAAATCTGGATGCTATATTTCTCAACAACAATCAATTTGAAGGCGAAATTCCCCAAAATTTGGGCAATTCCCCTGCGTCAGTGATAAATTTAGCAAACAACAAGTTGAGTGGAAACATCCCAGCAAGTTTGGGGTTTATGGGTTCTAAACTCAAGGAAATACTCTTCCTCAATAACCAGTTAACAGGTTGCATTCCTGAAGGAGTGGGACTGTTCACAGATATGCAAGTTCTGGATGTGAGTTTCAATTCACTGATGGGTCATTTGCCAGACACACTATCTTGTCTGCAAGAAATAGAAGTCCTGAATTTGGCGCATAACAAGCTTTCCGGGGAATTATCAGACGTGATCTGCTCTCTGAGAAGCCTAGTAAATCTAACCGTTGCTTACAATTTCTTTAATGGGTTTAGCCAGGAATGCTCAAGGCTTTTCTTTAGGAATGTGGGTTTTGATTTCTCAGATAATTGTATCCCGGGGAGGGACATGCAGAGACCTCAACCAGAGTGCTCTGTGATCCCAGGTGGTAGCCTAAATTGTCTGAGAATCCCTACACCAAAGCCTCTAGCTTGTGGTTCGTTGGCTGTAAGTACCTCTAAACAGAGTCATCCCAGTTCATCTTCCCCTTGA 1233 0.4509 MEKSRILALILLLLHLTAAKAAFGVGAGVGVGGSGGVVWVGGGTNTPEPPGSSVPKLDRAYTTLQAWKSAITEDPLRILDTWVGSNVCSYKGVFCANPEDEMAASGGPVVAGIDLNHANLQGTLVKELSLLTDISLLHLNSNRFTGTVPATLKDLASLEELDLSNNQLSGPFPTVTLYMPSLVYLDLRFNSFSGPLPEELFNKNLDAIFLNNNQFEGEIPQNLGNSPASVINLANNKLSGNIPASLGFMGSKLKEILFLNNQLTGCIPEGVGLFTDMQVLDVSFNSLMGHLPDTLSCLQEIEVLNLAHNKLSGELSDVICSLRSLVNLTVAYNFFNGFSQECSRLFFRNVGFDFSDNCIPGRDMQRPQPECSVIPGGSLNCLRIPTPKPLACGSLAVSTSKQSHPSSSSP 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g2323 410 Gene3D Ribonuclease Inhibitor 58 227 IPR032675 -
Glsi01g2323 410 Pfam Leucine rich repeat N-terminal domain 61 95 IPR013210 -
Glsi01g2323 410 SUPERFAMILY L domain-like 63 358 - -
Glsi01g2323 410 Pfam Leucine rich repeat 136 191 IPR001611 GO:0005515
Glsi01g2323 410 FunFam Leucine-rich repeat extensin-like protein 1 61 225 - -
Glsi01g2323 410 Gene3D Ribonuclease Inhibitor 228 348 IPR032675 -
Glsi01g2323 410 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 48 404 - -
Glsi01g2323 410 PRINTS Leucine-rich repeat signature 158 171 - -
Glsi01g2323 410 PRINTS Leucine-rich repeat signature 298 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g2323 Glsi-ChrGlsi01 85968525 85969757 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g2323 55 383 Leucine-rich Repeat extension Gene Families AT3G24480 51.642 8.42e-109 327