Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g2321 ATGTCGTGGCAAACTTACGTTGATGATCACTTGATGTGCGACATCGACGGCCAAGGCCAGCATCTCTCCAACGCTGCCATCATCGGCCTGGATGGATCTGTGTGGGCTCAGAGCTCTTCCTTCCCTCAGTTTAAGCCTCAAGAGATCAATGATATCATGAAAGATTTTGAGGAACCAGGTCATCTTGCTCCCACCGGCTTGCACCTTGGGGGCACCAAGTACATGGTAATCCAGGGAGAGGCTGGAGCTGTCATCCGTGGGAAGAAGGGATCTGGAGGTATCACCATAAAGAAAACTGGTCAAGCTGTAGTTATTGGCATCTATGAGGAACCAGTGACTCCTGGACAGTGCAACATGGTTGTGGAGAGGTTGGGAGATTATCTTATTGATCAGGCCCTACAGCAGAGAGGGAGAAGCAGTGCGAGAGCGGGTTCCCATTTTCTCAGCAAACAAAATCACAAAACTTGGGAGAAATTAACCCTAATCAACATGTCGTGGCAAACCTACGTAGATGAGCACCTTCTGTGCGAGATCGAAGGGAATCATCTCAGTTCTGCAGCTATCCTTGGCCAAGACGGCAGCGTTTGGGCCCAGAGCACCACTTTCCCTCCGTTCAAGCCTGAGGAAATAATTGCTATTATGAAAGACTTTGACGAGCCTGGATATCTTGCTCCAACTGGATTATATCTTGGTGGCACAAAATATATGGTAATCCAAGGTGAACCAGGAGCAGTCATTCGAGGGAAGAAGGGACCTGGTGGTGTTACTGTCAAGAAGACCAATCAGGCCTTAATCATTGGCATTTATGATGAACCAATGACTCCGGGCCAGTGCAACATGATAGTTGAAAGGCTTGGTGATTATCTCATTGATCAGGGTCTTTAA 885 0.4802 MSWQTYVDDHLMCDIDGQGQHLSNAAIIGLDGSVWAQSSSFPQFKPQEINDIMKDFEEPGHLAPTGLHLGGTKYMVIQGEAGAVIRGKKGSGGITIKKTGQAVVIGIYEEPVTPGQCNMVVERLGDYLIDQALQQRGRSSARAGSHFLSKQNHKTWEKLTLINMSWQTYVDEHLLCEIEGNHLSSAAILGQDGSVWAQSTTFPPFKPEEIIAIMKDFDEPGYLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTVKKTNQALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g2321 294 FunFam Profilin 1 133 - -
Glsi01g2321 294 PANTHER PROFILIN 1 132 IPR005455 GO:0003779
Glsi01g2321 294 SMART prof_2 1 133 IPR005455 GO:0003779
Glsi01g2321 294 SMART prof_2 164 294 IPR005455 GO:0003779
Glsi01g2321 294 SUPERFAMILY Profilin (actin-binding protein) 165 293 IPR036140 -
Glsi01g2321 294 Gene3D Dynein light chain 2a, cytoplasmic 162 294 - -
Glsi01g2321 294 Gene3D Dynein light chain 2a, cytoplasmic 1 132 - -
Glsi01g2321 294 CDD PROF 2 131 IPR005455 GO:0003779
Glsi01g2321 294 FunFam Profilin 164 294 - -
Glsi01g2321 294 ProSitePatterns Profilin signature. 1 8 IPR027310 GO:0003779
Glsi01g2321 294 CDD PROF 165 293 IPR005455 GO:0003779
Glsi01g2321 294 SUPERFAMILY Profilin (actin-binding protein) 2 131 IPR036140 -
Glsi01g2321 294 PRINTS Plant profilin signature 190 203 IPR005455 GO:0003779
Glsi01g2321 294 PRINTS Plant profilin signature 280 293 IPR005455 GO:0003779
Glsi01g2321 294 PRINTS Plant profilin signature 215 229 IPR005455 GO:0003779
Glsi01g2321 294 PRINTS Plant profilin signature 267 280 IPR005455 GO:0003779
Glsi01g2321 294 PRINTS Plant profilin signature 164 177 IPR005455 GO:0003779
Glsi01g2321 294 PRINTS Plant profilin signature 234 243 IPR005455 GO:0003779
Glsi01g2321 294 PRINTS Plant profilin signature 247 262 IPR005455 GO:0003779
Glsi01g2321 294 PRINTS Profilin signature 166 175 IPR005455 GO:0003779
Glsi01g2321 294 PRINTS Profilin signature 184 193 IPR005455 GO:0003779
Glsi01g2321 294 PRINTS Profilin signature 263 276 IPR005455 GO:0003779
Glsi01g2321 294 PRINTS Profilin signature 276 293 IPR005455 GO:0003779
Glsi01g2321 294 PRINTS Profilin signature 227 241 IPR005455 GO:0003779
Glsi01g2321 294 PRINTS Profilin signature 203 223 IPR005455 GO:0003779
Glsi01g2321 294 Pfam Profilin 164 293 IPR005455 GO:0003779
Glsi01g2321 294 Pfam Profilin 1 131 IPR005455 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g2321 Glsi-ChrGlsi01 85956836 85961109 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g2321 164 294 Cytoskeleton Gene Families AT4G29340 71.642 1.69e-70 212