Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g2312 ATGCCATTTTCCTTCCTCGTCTCTTTCGTCCTCTTTCTGAGCTATGCAAACTCTCAGTCTCAGCTCCATGATCGAGAACATGCAGTCCTACTGAAGATAAAGCAGTACCTGCAAGATCCACCATTCCTCACTCACTGGACCCCATCAAATTCCTCCCACTGTTCTTGGCCAGAGATCACCTGCACTGGTGGTTCTGGTTCTGTCACTGGGCTGGCTCTAATTAACACCAACATCACCCAAACAGTACCACCTTTCATCTGTGACCTCAAAAACCTCTCTTCCATTGATTTTCAATTGAATTATTTTCCTGGGGAGTTCCCAACAGTTCTCTACAACTGCTCCAAGCTGCAGCACCTCAACCTCTCGCAGAACTGCTTTGTTGGTAAGATTCCAGATGACATTGACCGATTAGCTAACCTACGTGTTCTTGACCTTGGTGCCAACAACTTCTCCGGTGACATTCCAGCAAGCGTCGGACGTTTAAAGGAGCTAAGAAACCTTCAACTTTATCAGTGTTTATTTAACGGCACTATCCGGGCTGAAGTAGGCAACTTGTCCAATCTTGAAGTCTTAAATATGGCCCTTAACAGCATACTCCCTCCCTCAAAGTTGCCGTCGAGCTTTACCCAGCTGAAGAAATTGAAGAATTTTCAGATGTACGAATCGAACTTGATCGGGGGAATCCCAGAAACAATTGGAGATACGGTGGCATTGGAGTACCTGGATTTATCGGGGAATGGCTTAAGTGGGAAAATTCCCAGCGGTTTGTTTACGCTGAAGAATCTAAGCACACTGTATCTTTACAAAAATAGGCTATCTGGGGAAATACCTGAAGTAATTGAAGCGTTCAACTTGACTTCCCTCGACCTTTCAGAGAATATTCTTACTGGGAAAATACCTGATGGTTTTGGAAAGCTCGAAAAGTTAAAGGGTTTGAGTTTGTCAATGAATCAATTATCAGGGGAGGTACCAGAAAGCCTTGGTCGTCTACCAGCTCTGATAGATTTTGGTCTATTTGAAAACAAACTATCCGGTACTCTTCCTCCGGACATCGGTCGCTACTCGCAGCTGGAAACCTTTCAGGTTGCATCGAATAGATTTACGGGAAAACTGCCAGAGAACTTATGCTATCATGGCAAGTTATTTGGATTAAGTGCTTTTGACAACAATTTAAGCGGGGAGCTGCCAGAATCGCTAAGAAATTGCAGCAACCTGAACCAGTTAAGACTCAACAATAACGAATTCACTGGCAAAATTCCCAATGGCCTTTGGACATCTCCAAATTTGATAACTTTAACTATCAACGAGAATAAGTTCACCGGGGAGCTTCCTGAAAGATTGTCTTGGAATCTTTCACTCTTAGCCGTAAGTTATAATCAGTTTTCTGGTAGAATTCCAGTAGGAGCATCTTCCTGGAGGAATCTGGTGGTGTTTAACGCCAGTAACAATCTCTTCAATGGAAGTATTCCACAAAAGCTAACTGGTCTTTCCCGGTTAACAACTCTGTTGCTTGATCGGAACCAACTAACGGGGCCACTTCCATCCAAGATCATATCATGGAAGTCTCTAACAGTTCTAAATTTGAGGCAAAATCAACTCATTGGACAAATCCCAGATGCAATTGGTCGGTTACCTGTCCTTACACAACTAGACTTGTCAGTAAATCAATTTTCTGGCCAAATTCCACCTCAACTGGGCCAATTGAACCCAACCAATCTCAATCTCTCCTCAAATCATTTGACGGGTAGGATTCCTAGTAAGTTTGAAAATCTTGTTTATGCCCGCTGCTTTCTGAACAATTCCGGTCTCTGTGCTGATACTGCAATACTAAACCTTACCTTATGTAATTCTGGCCCTCAAAGGTTAAGCAAGCGCTCATCTGTGTCTCTTGCTTTGGTCACAAGCCTGGTAGTGGTAGCCTCTTTAGCGGCCTTCTTGTCGTTACTCTTGATTATCAGAGTATACAGAAACAGAAAGCAAAAATTGGAAACTTCATGGAAGCTAACATCCTTTCAGAGGCTAGGTTTCACAGAATCAAACATCGTGTCATCAATGACGGATTACAATATCATAGGCAGAGGGGGATACGGTACAGTATACCGTGTTGCTGTCCATGATTCAGGGTATGTAGCGGTGAAAAAGATATGGAATAACCGAAAGTTGAAGCAGAAGCTTGAGAATGCATTTCTGGCAGAAGTTAAAATTTTGAGCAATATTCGTCATAACAATATTGTGAAGCTGCTGTGCTGTATTTCTAATGAGGATTCTCTACTGCTTGTCTATGAATATCTGGAAAACCATAGCCTTGATAGATGGCTGCACAAAAAGAGTGGGGCATCAGCTATGACAGGTCCAGTCCACAATGTTGCTCTTGATTGGCCAAAGAGATTGCAAATAGCCATTGGGGCTGCCCAAGGTCTAAGCTACATGCACCATGATTGCTCACCACCAGTTGTTCATCGAGATGTGAAAACAAGCAATATCCTTTTGGATTCTCAATTCAATGCAAAAGTTGCTGATTTTGGTCTGGCTAGGATGTTGATCAAGCCAAGCGAACTTGCTACCATGTCAGCTGTGGTTGGCTCATTTGGCTATATTGCTCCAGAATATATTCAAACAACGCGACTCAACGAAAAGATTGATGTGTTTAGCTTCGGGGTTGTCCTATTGGAACTGACAACTGGAAAAGAAGCTAGTTATGGAGATGAACACTCATCCCTTGCAGAATGGGCATGGCGTCACATGCAGGTTGGTGGCGATATAGAAGAAGTTCTAGACGAAGAAATAAAGGAAGCATGCTACTTGGATGAAATGTGCAGCGTCTTCAAACTTGGGGTGATGTGTACTGCGACACTGCCAGCTAGTAGGCCTTCCATGAAGGAGGTCTTAAAAATGCTTTGCAGGGATCCATTTGGACTTGGGGAAAAGAATGTTGGTATCTTTGATGCTGTTCCTCTCCTTAAGAATTCAAAAAGGGAGAATAGGTTGGACATTGATAATGCTTACTAG 3009 0.4307 MPFSFLVSFVLFLSYANSQSQLHDREHAVLLKIKQYLQDPPFLTHWTPSNSSHCSWPEITCTGGSGSVTGLALINTNITQTVPPFICDLKNLSSIDFQLNYFPGEFPTVLYNCSKLQHLNLSQNCFVGKIPDDIDRLANLRVLDLGANNFSGDIPASVGRLKELRNLQLYQCLFNGTIRAEVGNLSNLEVLNMALNSILPPSKLPSSFTQLKKLKNFQMYESNLIGGIPETIGDTVALEYLDLSGNGLSGKIPSGLFTLKNLSTLYLYKNRLSGEIPEVIEAFNLTSLDLSENILTGKIPDGFGKLEKLKGLSLSMNQLSGEVPESLGRLPALIDFGLFENKLSGTLPPDIGRYSQLETFQVASNRFTGKLPENLCYHGKLFGLSAFDNNLSGELPESLRNCSNLNQLRLNNNEFTGKIPNGLWTSPNLITLTINENKFTGELPERLSWNLSLLAVSYNQFSGRIPVGASSWRNLVVFNASNNLFNGSIPQKLTGLSRLTTLLLDRNQLTGPLPSKIISWKSLTVLNLRQNQLIGQIPDAIGRLPVLTQLDLSVNQFSGQIPPQLGQLNPTNLNLSSNHLTGRIPSKFENLVYARCFLNNSGLCADTAILNLTLCNSGPQRLSKRSSVSLALVTSLVVVASLAAFLSLLLIIRVYRNRKQKLETSWKLTSFQRLGFTESNIVSSMTDYNIIGRGGYGTVYRVAVHDSGYVAVKKIWNNRKLKQKLENAFLAEVKILSNIRHNNIVKLLCCISNEDSLLLVYEYLENHSLDRWLHKKSGASAMTGPVHNVALDWPKRLQIAIGAAQGLSYMHHDCSPPVVHRDVKTSNILLDSQFNAKVADFGLARMLIKPSELATMSAVVGSFGYIAPEYIQTTRLNEKIDVFSFGVVLLELTTGKEASYGDEHSSLAEWAWRHMQVGGDIEEVLDEEIKEACYLDEMCSVFKLGVMCTATLPASRPSMKEVLKMLCRDPFGLGEKNVGIFDAVPLLKNSKRENRLDIDNAY 1002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g2312 1002 Gene3D Ribonuclease Inhibitor 23 178 IPR032675 -
Glsi01g2312 1002 Gene3D Ribonuclease Inhibitor 179 281 IPR032675 -
Glsi01g2312 1002 SMART serkin_6 685 971 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi01g2312 1002 ProSitePatterns Serine/Threonine protein kinases active-site signature. 818 830 IPR008271 GO:0004672|GO:0006468
Glsi01g2312 1002 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 490 612 - -
Glsi01g2312 1002 Gene3D Transferase(Phosphotransferase) domain 1 764 970 - -
Glsi01g2312 1002 Pfam Leucine rich repeat 91 150 IPR001611 GO:0005515
Glsi01g2312 1002 Pfam Leucine rich repeat 284 343 IPR001611 GO:0005515
Glsi01g2312 1002 Gene3D Ribonuclease Inhibitor 379 620 IPR032675 -
Glsi01g2312 1002 Gene3D Ribonuclease Inhibitor 282 378 IPR032675 -
Glsi01g2312 1002 FunFam Receptor-like protein kinase HSL1 isoform A 23 176 - -
Glsi01g2312 1002 SUPERFAMILY Protein kinase-like (PK-like) 680 966 IPR011009 -
Glsi01g2312 1002 SUPERFAMILY L domain-like 364 592 - -
Glsi01g2312 1002 FunFam Kinase family with leucine-rich repeat domain-containing protein 764 976 - -
Glsi01g2312 1002 ProSiteProfiles Protein kinase domain profile. 685 972 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi01g2312 1002 FunFam Receptor-like protein kinase HSL1 665 763 - -
Glsi01g2312 1002 Pfam Leucine rich repeat N-terminal domain 25 61 IPR013210 -
Glsi01g2312 1002 SUPERFAMILY L domain-like 41 368 - -
Glsi01g2312 1002 FunFam Highly similar to receptor-like protein kinase 284 448 - -
Glsi01g2312 1002 Pfam Protein kinase domain 687 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi01g2312 1002 Pfam Leucine Rich Repeat 238 256 IPR001611 GO:0005515
Glsi01g2312 1002 SMART LRR_typ_2 496 520 IPR003591 -
Glsi01g2312 1002 SMART LRR_typ_2 544 568 IPR003591 -
Glsi01g2312 1002 SMART LRR_typ_2 235 259 IPR003591 -
Glsi01g2312 1002 SMART LRR_typ_2 306 330 IPR003591 -
Glsi01g2312 1002 SMART LRR_typ_2 185 211 IPR003591 -
Glsi01g2312 1002 SMART LRR_typ_2 137 161 IPR003591 -
Glsi01g2312 1002 ProSitePatterns Protein kinases ATP-binding region signature. 691 714 IPR017441 GO:0005524
Glsi01g2312 1002 Gene3D Phosphorylase Kinase; domain 1 656 763 - -
Glsi01g2312 1002 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 232 966 - -
Glsi01g2312 1002 FunFam Putative leucine-rich repeat receptor-like protein kinase family protein 181 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g2312 Glsi-ChrGlsi01 85879578 85882667 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g2312 20 998 Receptor kinase-like Gene Family AT5G25930 53.018 0.0 987
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Glsi01g2312 Pkinase 2.1e-50 CL0016