Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g2284 ATGGGTTGCATTTATTCAAAGGTTTGTATCGGTGAGGTCTGTACTCCAAGAGGCTCTAGAAACAACGAAGCCTATGAAAGAACAGGTGAGGTGCCCGTGTTCTCTCCGGCTTCCGCAGATGTTCAGGAAGGTGAAATTACGGGTCAGTGGAATCAATTAAGCATAACCAGAGACACTGAAGTAGGCATCAGAAGGCTAGCTAGGGTATCAGCACAGTTTCTACCTCCCGATGGCTCGCGGACCGTTAAGATCCCTTCGGAAAACTATGAACTGCGTTATTCGTTCTTATCACAGAGAGGATATTATCCCGATGCTCTTGATAAGGCAAACCAAGACAGTTTTTGCATTCACACCCCGTTTGGCACAAGCGCTGAGGACCATTTCTTCGGGGTTTTCGATGGGCATGGAGAGTCTGGAGCCGAGTGTTCGCAATTTGTGAAGCGAAAGTTATGTGAGAATTTGCTTAGGAATAGCAGATTTCATGTAGACGCTGCGAAGGCTTGTCACTCAGCTTATTTGGCGACAAACTCGGAGTTGCATGCTGATGTTTTGGATGATAGCATGAGTGGCACTACAGCAATTACGGTATTGGTTAGGGGTAGGACTATATATGTAGCTAATTCCGGTGATTCTAGGGCTGTGATTGCAGAGAGGAGAGGGAAGGATGTTGTGGCAGTTGACTTATCCTTTGATCAAACCCCTTTTAGGCCTGATGAACTTGAAAGAGTCAAACTTTGTGGAGCCAGAGTTCTTACACTGGATCAAATTGAAGGGCTAAAGAACCCTGACGTTCAATGTTGGGGCACAGACGAAGGAGATGATGGTGACCCGCCAAGATTGTGGGTGCCAAATGGGATGTATCCTGGTACAGCGTTCACGAGAAGCATAGGTGATTCCATTGCCGAGACCATTGGAGTTGTTGCTAACCCTGAGATTGTCGTCTTCGAGCTCACTCAAAATCATCCTTTCTTTGTGCTTGCCAGTGATGGGGTATTCGAGTTTCTATCCAGCCAAGCGGTGGTTGAAATGGTTGCGAAATTCAAAGATCCTCGTGATGCTTGTGCAGCAATTGTGGCTGAATCGTATCGACTTTGGCTACAGTATGAAACTCGTACAGATGATATTACAGTCATTGTTGTGCATATAAATGGTCTAACTCATACTGCTGTTGCTCAGTCTGTAAGATGTGGTGATGTTTTACAAACTCCAGTGCCTCAAGCCATTGAGGTGACAGGATCAGAATCTCCTTCCACCTTTAGATGGAACTCTAGGAACCATCATGCAAGGCATGAATTATCAAGGGCACGTCTCCGAGCGATTGAAACTTCCCTAGAGAATGGCCAAACTTGGATTCCTCAATCTTCAACCCACAGGAAGACATGGGAGGAAGAAGCACACATTGAGCAGGCATTGCAAGATCATTTTCTCTTTAGAAAACTTACTGATTCTCAATGTCATGTTTTATTGGATTGCATGCAAAGAGTTGAGGTCCAACCTGGAGATGTTATAGTCAAACAGGGTGGTGAAGGTGATTGTTTTTATGTTGTTGGTAGTGGAGAATTTGAGGTCTTGGCAACTCAGGAAGAAAACAATGGGGAGATGCCAAGAGTTTTGCAGCGCTACACAGCTGAAAAATTATCATGCTTTGGGGAACTTGCTCTGATGTATAATAAACCACTTCAGGCCTCTGTACGTGCCGTAACAAAAGGAACTCTCTGGGCATTAAAACGAGAAGAATTTCGAGGGATTTTAATGTCAGAGTTCACTAACTTATCATCCTTGAAGTTGCTTCGCTCTGTAGATCTCCTTTCAAGGTTGACAATTTTACAACTGAGTCAGATTTCAGACACCCTTTCTGAAGTTTCGTTCTCAAATGGGCAGACAATAATTGATAAAGATGAAGCCCTTGCATTGTACATTCTTCAGAAGGGACACGTGAAAATCACTTTTGACGTAGATTTATTGAGAAGTCCCAATGCATGCAGCCTCAAGCCCAGCAATCAAAATGAGGATGATGACTTACAGTGCAGGAAAGAAGTGTCAATAGAGAAGCCTGAGGGAAGCTATTTTGGGGAATGGGCACTTCTTGGTGAACATGTTGGTTCCTTAAGTGCTGTTGCTGTGGGTGATGTTGTATGTGCTGTACTAACAAAGGAAAATATTGAATCAGTGATAGGCCCCTTACAAAAGCTTTCTCGGGAAGGTCACAAGTTGAGGGATATTTCTTTCGACTGTTCCAAGGAATCGAGTAGAAGTTTTGATTTTTCATTCTATGATAAAGTCCAGCTCTCAGATTTGGAGTGGAAAAAGAGCCTATATTCCACTGACTGCTCTGAGATTGGGCTAACAAATATAAGAGACTCAGAAAATGTACTTACTTTGAAGAGATTTTCTAAGCCAAAGGTGAGAAGGTTGGGTAAGGAAGCACAAGTCTTGAAAGAGAAAAAACTGATGAAGAGTATAAGCTCTTCAGCTTGTATACCACAGGTTCTATGCACTTGTGCTGATCAAGTATATGCTGGGATACTACTAAATACACACCTTGCTTGCCCTTTGTCTTCCATACTTACAAGTCCTCTTGGTGAATCATCAGCACAATTTTGGGCTGCTTCTGTAGTTATTGCCTTAGAAGACTTGCACAAGAGTGGTGTTCTCTACAGAGGTGTGTCACCTGATGTTCTGATGTTGGACCAAACTGGACAGATCCAGTTAGTGGACTTCAGATTTGGGAAGGAGCTCTCAGGTGAGAGAACATTCACAATTTGTGGGATGGCAGACTCATTAGCTCCAGAGATCATTATGGGAAAAGGCCATGGCTTCCCTGCTGACTGGTGGGCATTGGGAATCTTGATATATTATATGTTACGGGGTGAGATGCCTTTTGGGTCATGGAGAGAAAGTGAACTTGACACTGTTGCCAAAATTGCAAAACGACAGCTATATATTCCAGAGACTTTCAGCCCTGAAGCTATTGATCTCATCACTAAGTTACTTGACGTGGAGCAAAGCACTAGACTTGGTAGCCAAGGACCTAGGTCTGTCAAGAGTCACCCATGGTTTAATGGTGTTGAATGGGAAGGGATTAGAAACCATAGCTTTCCTGTTCCTCCAGAAATTACTTCTCGTATAACTCAGTACTTAGATATTCATTCTGAGGATTGTAGTGCTTCTCAAAATTCCCCATCACAAGAGGTAGAAGAACTTGATCTGCCTGAATGGCTTGAGGACTGGTAG 3234 0.4357 MGCIYSKVCIGEVCTPRGSRNNEAYERTGEVPVFSPASADVQEGEITGQWNQLSITRDTEVGIRRLARVSAQFLPPDGSRTVKIPSENYELRYSFLSQRGYYPDALDKANQDSFCIHTPFGTSAEDHFFGVFDGHGESGAECSQFVKRKLCENLLRNSRFHVDAAKACHSAYLATNSELHADVLDDSMSGTTAITVLVRGRTIYVANSGDSRAVIAERRGKDVVAVDLSFDQTPFRPDELERVKLCGARVLTLDQIEGLKNPDVQCWGTDEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIVVFELTQNHPFFVLASDGVFEFLSSQAVVEMVAKFKDPRDACAAIVAESYRLWLQYETRTDDITVIVVHINGLTHTAVAQSVRCGDVLQTPVPQAIEVTGSESPSTFRWNSRNHHARHELSRARLRAIETSLENGQTWIPQSSTHRKTWEEEAHIEQALQDHFLFRKLTDSQCHVLLDCMQRVEVQPGDVIVKQGGEGDCFYVVGSGEFEVLATQEENNGEMPRVLQRYTAEKLSCFGELALMYNKPLQASVRAVTKGTLWALKREEFRGILMSEFTNLSSLKLLRSVDLLSRLTILQLSQISDTLSEVSFSNGQTIIDKDEALALYILQKGHVKITFDVDLLRSPNACSLKPSNQNEDDDLQCRKEVSIEKPEGSYFGEWALLGEHVGSLSAVAVGDVVCAVLTKENIESVIGPLQKLSREGHKLRDISFDCSKESSRSFDFSFYDKVQLSDLEWKKSLYSTDCSEIGLTNIRDSENVLTLKRFSKPKVRRLGKEAQVLKEKKLMKSISSSACIPQVLCTCADQVYAGILLNTHLACPLSSILTSPLGESSAQFWAASVVIALEDLHKSGVLYRGVSPDVLMLDQTGQIQLVDFRFGKELSGERTFTICGMADSLAPEIIMGKGHGFPADWWALGILIYYMLRGEMPFGSWRESELDTVAKIAKRQLYIPETFSPEAIDLITKLLDVEQSTRLGSQGPRSVKSHPWFNGVEWEGIRNHSFPVPPEITSRITQYLDIHSEDCSASQNSPSQEVEELDLPEWLEDW 1077
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g2284 1077 Gene3D Jelly Rolls 590 740 IPR014710 -
Glsi01g2284 1077 CDD CAP_ED 476 585 IPR000595 -
Glsi01g2284 1077 ProSiteProfiles cAMP/cGMP binding motif profile. 602 727 IPR000595 -
Glsi01g2284 1077 Gene3D Jelly Rolls 441 584 IPR014710 -
Glsi01g2284 1077 SUPERFAMILY cAMP-binding domain-like 594 729 IPR018490 -
Glsi01g2284 1077 ProSitePatterns PPM-type phosphatase domain signature. 128 136 IPR000222 GO:0043169
Glsi01g2284 1077 Pfam Protein phosphatase 2C 122 361 IPR001932 -
Glsi01g2284 1077 Pfam Cyclic nucleotide-binding domain 495 586 IPR000595 -
Glsi01g2284 1077 Pfam Cyclic nucleotide-binding domain 621 725 IPR000595 -
Glsi01g2284 1077 SMART PP2C_4 88 380 IPR001932 -
Glsi01g2284 1077 Pfam Protein kinase domain 787 1020 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi01g2284 1077 SMART cnmp_10 476 599 IPR000595 -
Glsi01g2284 1077 SMART cnmp_10 602 740 IPR000595 -
Glsi01g2284 1077 PRINTS cAMP-dependent protein kinase signature 512 526 - -
Glsi01g2284 1077 PRINTS cAMP-dependent protein kinase signature 721 733 - -
Glsi01g2284 1077 PRINTS cAMP-dependent protein kinase signature 547 556 - -
Glsi01g2284 1077 PRINTS cAMP-dependent protein kinase signature 497 511 - -
Glsi01g2284 1077 CDD CAP_ED 602 734 IPR000595 -
Glsi01g2284 1077 Gene3D - 80 383 IPR036457 -
Glsi01g2284 1077 FunFam Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 450 590 - -
Glsi01g2284 1077 ProSiteProfiles PPM-type phosphatase domain profile. 92 382 IPR001932 -
Glsi01g2284 1077 SUPERFAMILY cAMP-binding domain-like 433 586 IPR018490 -
Glsi01g2284 1077 SUPERFAMILY PP2C-like 80 384 IPR036457 -
Glsi01g2284 1077 Gene3D Transferase(Phosphotransferase) domain 1 851 1038 - -
Glsi01g2284 1077 ProSiteProfiles Protein kinase domain profile. 766 1020 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi01g2284 1077 MobiDBLite consensus disorder prediction 1053 1077 - -
Glsi01g2284 1077 Gene3D Phosphorylase Kinase; domain 1 765 1040 - -
Glsi01g2284 1077 ProSiteProfiles cAMP/cGMP binding motif profile. 476 585 IPR000595 -
Glsi01g2284 1077 SMART serkin_6 774 1020 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi01g2284 1077 SUPERFAMILY Protein kinase-like (PK-like) 758 1053 IPR011009 -
Glsi01g2284 1077 FunFam Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 87 384 - -
Glsi01g2284 1077 CDD PP2Cc 108 382 IPR001932 -
Glsi01g2284 1077 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 456 1056 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g2284 Glsi-ChrGlsi01 85655261 85662653 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g2284 1 1077 PP2C-type Phosphatase Gene Family AT2G20050 68.636 0.0 1516
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PKA-PKG Glsi01g2284 Pkinase 2e-32 CL0016