Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g2283 ATGGGAACGACTAGAATGAATGAAAAGTCAAAAGAAGAAGAAACGAAAGAAACGGGTAAAACAAAACAAGAGGCTGAGCTGCAGAGGAGGCTCGGTGGTGTGGTAATTTACTCAAAATGCAGAGACAGAGGCAGCTTCAGGATAGAGGCGTTGTGGAGGAGGTTGGGTGGGAAGAGAAAGAGAGTAAGGAGTTTGTGTGGAGACATATCATCAATGCATGTGTGCCGAGAGATGGTGAGAGTGATTCCCATGGCGTCTTCCATTCGCCCCTCTCTCCCTTCCTTCAAGTTATCCGCCGGTTCTCGTTTCTGTCCTTCTCTCTCTTCCTACAACCCTTCTCGGCGCCTCTCTTTCTATAATCACGCTGATCCACAGTCCCATAATTTTGGCCTGAAAGCATCCAAGCAGTTGAGACGAGATGGTAACTGTTTGAGAGTAATGGCATCTGAGAATGTGTACCAAGCAAGCACAGCTGCTGCCCCAGAAGATGTACTAGAGTGGGTCAAACAAGACAACCGAAGAATGCTTCATGTTGTATATCGTGTTGGCGATTTGGACAGGACCATCAAATTTTATACAGAGTGCCTGGGAATGAAGTTGCTGAGAAAGCGTGACATACCAGAGGAGAGATACACTAATGCCTTTCTTGGATATGGACCTGAAGATTCACACTTTGTTATTGAACTGACATATAATTATGGGGTTGACGAGTATGATATTGGAAAGGGATTTGGCCATTTTGGTATCGCTGTTGATGATGTTGCAAAAACAGTGGAACTCATTAGAGCTAAGGGTGGCAAAATAACTAGAGAGCCTGGGCCTGTCAAGGGAGGTAGCACAGTAATTGCATTTATTGAAGATCCCGATGGATACAAATTTGAACTTTTGCAAAGAGGTCCCAGTCCTGAGCCTTTGTGCCAAGTAATGCTTCGAGTAGGTGATCTTAATCGTTCCATAGAATTTTATAAGAAGGCTTTTGGTATGGAGCTTCTTCGTACACGAGATAATCCAGAGTACAAGTATACCATTGCAATGCTGGGTTATGGTCCAGAGGATAAAAGTTCTGTTCTGGAGTTGACTTACAACTATGGAGTCACTGCATATGACAAAGGAAATGCTTATGCTCAGATTGCTATCGGCACAGATGATGTGTATAGAACTGCAGAAGCTATTAAACTCGTTGGAGGAAAGATTACTCGGGAACCTGGACCATTACCTGGTATCAGTACAAAAATTACAGCATGCTTGGATCCTGATGGTTGGAAGACGGTTTTTGTCGATAATGTTGATTTTCTTAAGGAGTTGGAGTAG 1311 0.4371 MGTTRMNEKSKEEETKETGKTKQEAELQRRLGGVVIYSKCRDRGSFRIEALWRRLGGKRKRVRSLCGDISSMHVCREMVRVIPMASSIRPSLPSFKLSAGSRFCPSLSSYNPSRRLSFYNHADPQSHNFGLKASKQLRRDGNCLRVMASENVYQASTAAAPEDVLEWVKQDNRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEERYTNAFLGYGPEDSHFVIELTYNYGVDEYDIGKGFGHFGIAVDDVAKTVELIRAKGGKITREPGPVKGGSTVIAFIEDPDGYKFELLQRGPSPEPLCQVMLRVGDLNRSIEFYKKAFGMELLRTRDNPEYKYTIAMLGYGPEDKSSVLELTYNYGVTAYDKGNAYAQIAIGTDDVYRTAEAIKLVGGKITREPGPLPGISTKITACLDPDGWKTVFVDNVDFLKELE 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g2283 436 NCBIfam lactoylglutathione lyase 174 299 IPR004361 GO:0004462|GO:0046872
Glsi01g2283 436 ProSitePatterns Glyoxalase I signature 1. 307 328 IPR018146 GO:0004462|GO:0046872
Glsi01g2283 436 FunFam Lactoylglutathione lyase 171 300 - -
Glsi01g2283 436 CDD GlxI_Ni 175 296 - -
Glsi01g2283 436 Gene3D - 301 436 IPR029068 -
Glsi01g2283 436 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 174 298 IPR037523 -
Glsi01g2283 436 ProSitePatterns Glyoxalase I signature 2. 241 253 IPR018146 GO:0004462|GO:0046872
Glsi01g2283 436 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 307 422 IPR004360 -
Glsi01g2283 436 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 175 295 IPR004360 -
Glsi01g2283 436 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 305 428 IPR029068 -
Glsi01g2283 436 CDD GlxI_Ni 305 426 - -
Glsi01g2283 436 Gene3D - 146 299 IPR029068 -
Glsi01g2283 436 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 173 303 IPR029068 -
Glsi01g2283 436 ProSitePatterns Glyoxalase I signature 1. 177 198 IPR018146 GO:0004462|GO:0046872
Glsi01g2283 436 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 304 428 IPR037523 -
Glsi01g2283 436 PANTHER LACTOYLGLUTATHIONE LYASE 153 436 - -
Glsi01g2283 436 FunFam Lactoylglutathione lyase 301 436 - -
Glsi01g2283 436 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g2283 Glsi-ChrGlsi01 85647982 85654686 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g2283 307 425 Calmodulin-binding Proteins AT1G08110 27.586 5.45e-11 60.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi01g2283 01 85647982 85654686 Glsi01g2283 01 85647982 85654686 ECH